KEGG   Sphingobacterium mizutaii: 4412673_03827
Entry
4412673_03827     CDS       T05395                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
smiz  Sphingobacterium mizutaii
Pathway
smiz00521  Streptomycin biosynthesis
smiz00523  Polyketide sugar unit biosynthesis
smiz00525  Acarbose and validamycin biosynthesis
smiz00541  Biosynthesis of various nucleotide sugars
smiz01100  Metabolic pathways
smiz01110  Biosynthesis of secondary metabolites
smiz01250  Biosynthesis of nucleotide sugars
Module
smiz_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:smiz00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    4412673_03827 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    4412673_03827 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    4412673_03827 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    4412673_03827 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    4412673_03827 (rfbB)
Enzymes [BR:smiz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     4412673_03827 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 3Beta_HSD adh_short NAD_binding_10 KR NmrA
Other DBs
NCBI-ProteinID: SNV62822
UniProt: A0AAJ4XFA7
Position
1:complement(4346902..4347948)
AA seq 348 aa
MKTIIITGGAGFIGSHVVREFVRKYPNYQIINLDALTYAGNLENLIDIQDAPNYSFVKAD
ITDANRINAIFQEYKPDGVIHLAAESHVDRSITDPSAFVMTNVIGTVNLLNAAKELWKDN
FEGRRFHHVSTDEVYGTLSETGLFTEETSYDPHSPYSASKASSDHFVRAYHDTYGLPVVI
TNCSNNYGPNHFPEKLIPLCIHNILNNKPLPIYGDGKFTRDWLFVKDHAKAIDLVYHNGK
LGGSYNVGGFNEWKNIDLVKELCNQMDSKLKRDPGSSAKLITFVKDRPGHDLRYAIDATK
INQELGYKPSVTFEEGLSQTIDWFLNNQEWLDNVTSGDYQNYYNKQYS
NT seq 1047 nt   +upstreamnt  +downstreamnt
atgaagactataataataacaggtggagctggatttattggttcacatgtagttagggaa
tttgtgcgtaaatatcctaattatcagataataaatttagatgccttaacttatgcaggg
aatttagagaatttaattgatattcaagatgcccctaattattcatttgtaaaggctgat
attactgatgccaatagaattaatgctatttttcaggaatataaaccagacggagttatc
catttagcagctgagtcgcatgtggaccgttcaataactgatccatcggcatttgtaatg
accaatgtgattggaacggtaaatcttttgaatgctgcaaaggaactctggaaagataac
tttgaaggtaggaggtttcatcatgtttcaacagatgaggtatatggtaccttaagcgaa
accggactttttacagaagaaacctcttacgatccacattcgccttattcagcttctaaa
gcttcttccgatcatttcgtaagagcgtatcatgatacttatggcttgccggttgttatt
acaaactgttcaaacaactatggcccgaatcattttcctgaaaaattgattccactatgt
attcataacatcttaaataataagccactaccaatttatggtgatggcaaatttaccaga
gattggttatttgtaaaagatcacgctaaagcaattgatttagtgtatcataatggaaaa
ttggggggatcatataatgttggtggctttaatgaatggaaaaatatagatcttgttaag
gaactatgcaatcaaatggattcaaaattaaagagagatccaggttcttcggcaaaactt
atcacatttgttaaagataggccaggtcatgatttgagatatgccattgatgcaacaaaa
attaatcaagaattgggctataaaccctcagttacattcgaggaggggttatctcaaaca
attgactggtttttgaataatcaagaatggttggacaatgtgacctcaggtgactatcag
aattattacaacaaacaatattcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (13)   

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