KEGG   Sinorhizobium meliloti SM11: SM11_pD1005
Entry
SM11_pD1005       CDS       T01885                                 
Symbol
rmlB2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
smx  Sinorhizobium meliloti SM11
Pathway
smx00521  Streptomycin biosynthesis
smx00523  Polyketide sugar unit biosynthesis
smx00525  Acarbose and validamycin biosynthesis
smx00541  Biosynthesis of various nucleotide sugars
smx01100  Metabolic pathways
smx01110  Biosynthesis of secondary metabolites
smx01250  Biosynthesis of nucleotide sugars
Module
smx_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:smx00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    SM11_pD1005 (rmlB2)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    SM11_pD1005 (rmlB2)
   01055 Biosynthesis of vancomycin group antibiotics
    SM11_pD1005 (rmlB2)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    SM11_pD1005 (rmlB2)
   00525 Acarbose and validamycin biosynthesis
    SM11_pD1005 (rmlB2)
Enzymes [BR:smx01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     SM11_pD1005 (rmlB2)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase NAD_binding_4 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind adh_short KR NAD_binding_10
Other DBs
NCBI-ProteinID: AEH83837
UniProt: F7XH11
Position
pSmeSM11d:1076837..1077904
AA seq 355 aa
MNILVTGGAGFIGSALCRYLVADPGNRVINLDKLTYAGNPASLRQIEALPNYRFVRGDIC
DEAAMADVLAAERIDRIMHLAAETHVDRSIDGPSTFIETNIVGTFRLLQAAMKYWRSLPA
TAAERFRFHHVSTDEVFGDLSLDDNSFREETPYAPSSPYSASKAASDHLVRAWHHTFGLP
VVITNCSNNYGPFHFPEKLVPLIILNALEERPLPVYGNGTNIRDWLYVDDHARALDLVAT
NGVTGESYNIGGGSERSNLAVVQTICDILDQKQPQRSCRSYRDLVAFVDDRPGHDQRYAM
DTSKIERELGWKPLESFETGLSRTIDWYLANSWWWRPIRERNYRGERLGRAVAGR
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgaacatcctcgtcaccggcggcgccggtttcattggctccgcgctctgccgatacctt
gtggccgatccaggcaatcgtgtcatcaacctcgacaagctcacctatgccggcaatccg
gcatcgctcaggcaaatcgaggccttgccgaactaccggttcgtccggggcgacatttgc
gacgaggcagctatggccgacgtccttgctgcggagcgtatcgaccgcattatgcatctt
gccgcggaaacacatgtggaccggtcgattgacggacctagcacattcatcgagacgaat
attgtcggcacattcaggctgctccaggcggcaatgaaatattggcgcagcctaccggca
acggcagccgaacggttccgcttccaccatgtttcaactgacgaagtgttcggcgatctt
tcccttgatgacaacagtttccgcgaggagacgccctatgctccatcctcgccctattcc
gcctcaaaggctgcatctgatcaccttgttcgcgcctggcatcacacctttggcctgccc
gtcgtcattaccaattgttccaataactatggtccgtttcactttccggaaaagctggtg
cctttgatcattctgaatgccctggaggaaaggccgctgccggtctacggcaacggcacc
aatattcgcgactggctttatgttgacgaccacgcacgcgctctggatctggtcgcgacg
aacggcgtaaccggcgagagctacaatatcggtggaggctccgagcgctccaacctcgcg
gtcgtccagacgatctgcgatattctcgatcaaaagcagccgcagcgaagctgccgaagc
tatcgcgaccttgtcgcgtttgtcgacgatcgaccgggccacgaccaacgctatgccatg
gatacctccaagatcgaacgcgaacttggctggaaaccgttggaaagcttcgagacggga
ttgtcgcgaacgatcgactggtatctggccaatagctggtggtggcggccgatccgcgaa
cggaactatcgcggcgagcggctcggcagagcggtggccgggcgatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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