KEGG   Salvelinus namaycush (lake trout): 120033136
Entry
120033136         CDS       T07522                                 
Name
(RefSeq) tubulin beta-4B chain-like
  KO
K07375  tubulin beta
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04145  Phagocytosis
snh04517  IgSF CAM signaling
snh04540  Gap junction
snh04814  Motor proteins
snh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120033136
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    120033136
  09144 Cellular community - eukaryotes
   04540 Gap junction
    120033136
  09142 Cell motility
   04814 Motor proteins
    120033136
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120033136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120033136
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120033136
   04147 Exosome [BR:snh04147]
    120033136
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120033136
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120033136
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120033136
  Exosomal proteins of colorectal cancer cells
   120033136
  Exosomal proteins of bladder cancer cells
   120033136
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 120033136
NCBI-ProteinID: XP_038835341
UniProt: A0A8U0Q397
Position
40:complement(3953022..3956419)
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEEGEEDMG
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggagattgttcatctgcaggccggtcaatgtggaaatcagatcggtgccaagttt
tgggaggttatcagtgacgagcatggaatagacccaactggcacttaccatggagatagc
gatctgcagcttgagagaatcaatgtgtactacaatgaggcaacaggtggcaagtatgtt
cctcgtgccattctagttgatctggagcctggcacgatggactctgtccgctctggacca
tttggccaaatattcagaccggacaactttgtctttggacagagtggtgcaggtaacaac
tgggcaaagggccattacactgagggagcagagctggtcgactctgtcctggatgtggtg
agaaaggaagccgagagctgcgactgtcttcagggtttccagctcacccactcccttgga
ggcggcacgggctctggcatgggtaccctgttgattagcaagatccgtgaggagtaccct
gaccgcatcatgaacaccttcagtgtggtgccctcccccaaagtgtcagacaccgtggtg
gagccctacaacgccaccctgtctgtgcatcagctagtagagaacactgacgagacttac
tgcatcgacaacgaggccttgtatgacatctgctttcgcaccctgaagctgacgactccc
acttacggggacctcaaccacctggtgtcagccaccatgagtggtgtcaccacctgcctg
cgcttccccggccagctcaacgccgacctacgtaagctagctgtcaacatggtcccattc
ccccgcctgcatttcttcatgccaggctttgcccccctcaccagcagaggtagccagcag
tacagagcgctgacggtgcccgaactcacccagcagatgttcgatgccaagaacatgatg
gccgcctgcgacccccgccacggccgttacctcaccgtggccgccatcttccgtggccgc
atgtccatgaaggaggtggacgagcagatgctgaacgtgcagaacaagaacagcagctac
ttcgtcgaatggatccccaacaatgtcaagaccgcagtctgcgacatcccaccccgcggc
ctcaagatggccgctaccttcatcgggaacagcacggccatccaggagctgtttaagcgc
atctctgagcagttcacagccatgttccgccgcaaggccttcctgcactggtacaccgga
gagggcatggacgagatggagttcaccgaggccgagagtaacatgaacgacctggtgtct
gagtaccagcagtaccaggatgccaccgccgaggaggagggcgagtttgaagaggaggga
gaggaggatatgggttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system