KEGG T03916: 105195203

Solenopsis invicta (red fire ant): 105195203

Entry

105195203         CDS       T03916

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

soc Solenopsis invicta (red fire ant)

Brite

KEGG Orthology (KO) [BR:soc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    105195203
Spliceosome [BR:soc03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105195203
Complex C
   U4/U6.U5 tri-SnRNP related factors
    105195203

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

105195203

NCBI-ProteinID:

XP_011158801

Position

5:complement(22938955..22941745)

AA seq 764 aa
MKRSHSRRDEEESEEHYRKRKDHKRDDDHKESRHNGDHKSSKHHDDHRSSRRNDEHRSSR
RDDHRGSRREDDHRGSRRDDHRDRRYNDEREDARDSDGEAGGKRDSLREEIGSRYYGEPD
KTRENPAEVKQKRAADLLTSKTGGAYIPPAKLRMLQAEITDKSGAAYQRIAWEALKKSIH
GYINKVNTSNIGIITRELLRENIIRGRGLLARSIIQAQAASPTFTPVYAALTAIINSKFP
NIGELVLSRLVLQFKRGFKRNDKPLCISSGTFIAHLVNQRVAYEIIALEILTLLLETPTD
DSVEVAIAFLKESGMKLREVSRRGIEAIFEMLRNILHEGQLDKRVQYMIEVIFQVRKDGF
KDHEAVPEELDLVEEENQITHLIKLDDEINAQDILNVFKFDPDYLATEEKYKQLCKEILG
SDVSDSEGDDEDGEGESSDEESGTEQTEGKEGIIVDNTETNLTALRRTIYLTIHSSLDFE
ECAHKLMKMQLKPGQEIELCHMFLDCCAEMRTYEKFFGLLAGRFCAINKMYVTPFEQIFR
DSYQTIHRLDTNKLRNVSKFFAHLLFTDSISWSVLSCIKLNEEDTTSSNRIFIKILFQEL
SEYMGLAKLNERVKDITLQEVFEGLFPRDDPKNTRFAINFFTSIGLGGLTDDLREHLKSH
PKPVVVPVLTTKQEELSSSDESSSSSSSSSSGSTSTDSSSSSSSSSSLSSSSEEEDKVPA
KKKKRVQHKRKEKKSSKPKDKKEEKSKKTQSRKKERGKTSKKDK

NT seq 2295 nt +upstreamnt +downstreamnt
atgaaaagatcgcattcgcgaagagacgaggaggagagcgaagaacactatcgcaagcgc
aaggatcacaagcgtgacgacgatcacaaggagtccaggcataatggcgatcacaagagc
tccaagcatcacgatgatcacagaagttccagacgtaacgacgaacacaggagttccagg
cgggacgatcaccgcggctccaggcgtgaagacgatcatcggggatctcggcgtgacgat
cacagagatcgtaggtacaacgacgaacgtgaagatgccagggacagcgacggcgaagcg
ggcggcaagcgtgattcgctgcgggaggagatcggcagcaggtactacggggaaccggac
aagacgcgagagaacccagcagaggtcaaacaaaagcgagcggcggatcttttgacgtcg
aagacgggaggcgcgtatatcccgcctgccaagttgcgtatgcttcaagcagaaattacc
gacaagtcgggagctgcttaccagcgcatcgcatgggaagctctaaagaagtccatccac
ggatacatcaacaaagttaacaccagcaatatcgggatcataacgcgggagctgctgcgc
gagaacattattcgtggtagaggtttgttagcacgatctatcattcaagcgcaagccgcg
tcaccaacgttcacgccagtttatgcagcgctgacagctataataaattccaagtttcct
aacataggtgaactagtgctttcgcgacttgtattacagttcaagcgtggatttaagagg
aatgataaacctttatgtatatcctcaggaacttttatagcacatttagttaatcagcgt
gtagcttatgagattattgcgttggaaatcttgactctgctgctggaaacgccgacggac
gattccgtcgaagtggccatagcgttcttgaaggaaagcggaatgaaactgagagaggtt
tcgcgaagaggtattgaagccatctttgaaatgctgaggaatatattgcacgagggacaa
ttagacaagcgagtccaatatatgatagaagttatattccaggtcaggaaagatggattt
aaggatcatgaggctgtgccagaagaactggatcttgtggaggaagaaaatcaaataaca
catttgataaaattagatgacgaaataaatgcgcaagatatattaaacgtgttcaagttt
gacccagactatcttgccactgaagaaaaatataaacaactatgtaaagaaattcttggc
tcggatgtcagtgactctgaaggcgacgatgaagatggagagggagagagctcagacgaa
gaaagtggcacagaacaaactgagggaaaggaaggaattatagtcgataatacggaaaca
aatctgactgcgttacgacgaactatatatctgacaatacactcgtcgctcgattttgaa
gagtgtgcacataagttgatgaaaatgcaacttaaacctgggcaagagatcgagctatgt
catatgtttttggactgttgcgcggagatgcggacatatgagaagttctttggccttttg
gccggtcggttttgcgcgattaataaaatgtatgtgactccattcgagcaaatctttagg
gattcttatcaaacgatacaccgcctcgacaccaacaaattgcgcaatgtgtcaaagttt
ttcgcgcatttattgttcacagattcgatatcgtggagcgttctttcgtgcataaaactg
aacgaagaggacaccacgagttccaacagaatatttatcaagatcttgtttcaagagctg
tctgagtacatgggtttagcgaagctcaatgaacgggttaaagacataacgttgcaagaa
gtgtttgaaggactatttcctagagacgacccgaagaacacacgtttcgcaatcaacttc
ttcacgtcgatcggcttgggtggtttgacggacgatttgagggaacatttaaagtcgcat
ccaaaaccagttgttgtgccagtcttaactaccaagcaggaggagctctcaagttctgat
gagtctagttcgtcatccagctccagctcgtctggttcgacgtcaaccgattcttcttct
tcgtcgtcgtcgtcgtcgtcgttgtcgtcgtcatcggaggaggaagataaggttccggca
aagaaaaagaaaagagtacagcataaacgaaaagaaaagaaatcgtctaagccaaaggac
aagaaagaagagaaatctaagaagacacaaagcaggaagaaggagagaggcaagacatcg
aaaaaggacaaataa

All links

Gene (84)   
   RefGene (81)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (90)   

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