KEGG   Solenopsis invicta (red fire ant): 120359627
Entry
120359627         CDS       T03916                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
soc  Solenopsis invicta (red fire ant)
Brite
KEGG Orthology (KO) [BR:soc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soc03041]
    120359627
Spliceosome [BR:soc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    120359627
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    120359627
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 120359627
NCBI-ProteinID: XP_039313644
Position
15:2453216..2455679
AA seq 645 aa
MKRLHSRRDEEESEEHYRKRKNYKRGDEEFRHNDDHGSSRRNGGQCGSRRENDHRGDDHR
SRRYNDERGDARDSDGEAGGKREEIGSRYYGDSDKARENPAENAKQKRAANLLTSKTGGA
YIPLAKLLMLQAEITDKSGATYQRIAWEALKKSIHGYINKVNTSNIGIITRELLRQNIVR
GRGLLARSIIQAQAASPMFTPVYAALTAVINSKFPNIGELVLTRLVLQFKRGFKRNDKPL
CISSGTFIAHLVNQHVAYEIIVLEILTLLLETPTDDSVEVAIALLKESGMKVRGFSRRGI
EAIFETLRNILHEGQLDKRVQYMIEVIFQIRKDGFKDHEAVPEELDLVEEENQITHLIKL
DDEINAQGILNVFKFDPDYLATEEKYKQLCKEILCSDIGGSNIGDDEDGEEESSDEEGGM
EQAEEKEGVIVDKTETNLIALRRDIYLTISSSNVFEECAHKLLKMQLKPGQEIELCHMVL
DCCAEKRTYEKFFGLLAGRFCAINKVYVRRFEQIFRDSYQTIHRLDTNKLRNVSKFFAHL
LFTDSISWSVLSCIKLNEENTTSSNRIFIKILFQELSEYMGLAKLNGRVKDITLQEVFEG
LFPRNDPKNTRFAINFFTSIGLGGLTDDLRERLKSHPKPVAVCRS
NT seq 1938 nt   +upstreamnt  +downstreamnt
atgaagagattgcattcgcgaagagacgaggaggagagcgaggaacactatcgcaagcgc
aagaattacaagcgtggcgacgaggagttcaggcataacgatgatcatggaagttccaga
cgtaacggcggtcagtgcggctccagacgtgaaaacgatcatcggggtgacgatcacaga
agtcgtagatataacgacgagcgtggagatgccagggacagcgacggcgaagcgggcggc
aagcgggaggagattggcagccgctactacggggattcggacaaggcgcgagaaaaccca
gcggagaacgccaagcagaagcgagcggcaaatcttttgacgtcgaagacgggaggcgcg
tacatcccgcttgccaagttgcttatgcttcaagcggaaatcaccgacaagtcgggagcc
acttaccagcgcatcgcatgggaagcactaaagaagtccatccatggatacattaacaag
gttaacaccagtaatatcgggatcataacgcgggagttgctgcgccagaatattgtccgt
ggtagaggtttgttagcacggtctatcattcaggcgcaagccgcgtcaccgatgttcacg
ccagtttatgcagcactgacggctgtaataaattccaagtttcctaacataggtgaacta
gtgctgacgcgacttgtattacagttcaagcgtggatttaagaggaatgataagcctttg
tgtatatcctcgggaacttttatagcacatttagttaatcagcatgtagcttatgagatc
attgttttggagatcttgactctgctgttggaaacgccgacggacgattccgtcgaagtg
gccatagcgcttttgaaggaaagcggaatgaaagtgagagggttttcgcgaagaggtatc
gaggccatctttgaaacgctgaggaacatactgcacgagggacaattagacaagcgagtc
cagtatatgatagaagttatattccagatcaggaaagatggatttaaagatcacgaggct
gtgccagaggaactggatcttgtggaggaggaaaatcaaataacgcatttgataaaatta
gatgacgaaataaacgcgcaaggtatattaaatgtgttcaagttcgatccagactatctt
gccaccgaagagaagtataaacaactgtgtaaagaaattctttgctcggacatcggtggc
tcgaacatcggcgacgacgaggatggagaagaggagagctcggacgaggaaggtggcatg
gaacaagccgaggaaaaggaaggagtgatagtcgataaaacggaaacgaatctgatcgcg
cttcgacgagatatatatctgactataagctcgtcgaacgttttcgaagagtgcgcgcat
aagttgctgaaaatgcaacttaaacctgggcaggagatcgagttatgtcacatggttttg
gactgttgcgcggagaagcgaacgtatgagaagttcttcggccttttggccggtcggttt
tgcgcaattaataaagtatatgtgaggcgatttgagcaaatttttagggattcctatcaa
acaatacaccgtctcgacaccaacaaattgcggaatgtgtcaaagttcttcgcacattta
ctgttcacagactcaatatcgtggagcgttctgtcgtgcataaaactgaacgaggagaac
accacgagttccaacagaatattcatcaagattctgtttcaggagctgtctgaatacatg
ggtctagcgaagctaaatggacgagttaaagacattacgttgcaagaggtgtttgaagga
ctatttcccagaaacgacccgaagaacacacgtttcgcaatcaacttcttcacgtcgatc
ggcttgggtggtttgacggatgatttgagagaacgtttgaagtcccatccaaagccagtt
gctgtgtgccggtcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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