KEGG   Shewanella oncorhynchi: RA178_07510
Entry
RA178_07510       CDS       T09381                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sog  Shewanella oncorhynchi
Pathway
sog00521  Streptomycin biosynthesis
sog00523  Polyketide sugar unit biosynthesis
sog00525  Acarbose and validamycin biosynthesis
sog00541  Biosynthesis of various nucleotide sugars
sog01100  Metabolic pathways
sog01110  Biosynthesis of secondary metabolites
sog01250  Biosynthesis of nucleotide sugars
Module
sog_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sog00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    RA178_07510 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    RA178_07510 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    RA178_07510 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    RA178_07510 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    RA178_07510 (rfbB)
Enzymes [BR:sog01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     RA178_07510 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 NAD_binding_4 3Beta_HSD RmlD_sub_bind adh_short KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: WMB74449
UniProt: A0AA50KGF2
Position
1650810..1651889
AA seq 359 aa
MKILVTGGAGFIGSAVVRNIIENTNDSVINVDKLTYAGNLESLTSVADNARYTFEKVDIC
DRAELDRTFVLYQPDAVMHLAAESHVDRSITGPSDFIQTNIFGTYTLLEAARHYWMQLDA
ERKSAFRFHHISTDEVYGDLPHPDEQEGQAVNQELPLFTESTSYAPSSPYSASKASSDHL
VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLFVE
DHARALYKVVTEGKIGETYNIGGHNEKQNLEVVQAICNILDTLVPKETPYADQIIYVTDR
LGHDRRYAIDSSKMSRELNWKPQETFETGLHKTVKWYLANQEWCQHVQDGTYQRERLGI
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgaagattttagttactggtggtgcaggttttattggttctgcagtggtaagaaacatc
atcgaaaataccaatgatagtgttattaacgtagacaaactgacctatgcaggcaattta
gagtcactgaccagcgttgctgacaatgctcgctacacatttgaaaaagtcgatatttgt
gacagagctgaactcgataggacttttgtactgtatcagccagatgctgttatgcatcta
gctgcagagtctcatgttgaccgctcaattactggtccttcagattttattcagaccaat
atttttggaacttacactttattagaagctgcacgccattattggatgcaactcgatgct
gagcgtaaatcagcatttcgctttcaccatatttcaactgatgaagtgtatggcgattta
cctcatcccgatgagcaagaaggacaagcagtaaatcaagagctacctttatttactgaa
tcgacttcctatgcgccaagtagcccctattctgcatctaaagcttctagtgaccatcta
gtgcgtgcatggttacgtacctatggcttacctaccatagtgactaattgctccaacaat
tatggtccttatcacttccctgaaaagctgatcccgctagtgatccttaatgcactcgaa
ggcaagccattgcctatttacggtaaaggtgatcagatccgcgattggcttttcgtagaa
gatcatgcccgtgcgctatataaagtagtcacagaggggaagattggcgaaacctataat
atcggtggtcataacgaaaaacaaaatcttgaagtggtacaagctatttgtaatatttta
gatactctggttccaaaagaaactccttacgccgatcaaatcatctatgtgaccgacagg
ctaggtcatgaccgccgctatgctattgattcttctaaaatgagccgtgagctaaattgg
aaaccacaagaaacttttgaaacaggcctacataaaacggttaagtggtatttagcgaat
caagagtggtgtcaacatgttcaagatggcacttatcaacgagagcgtttaggcatttaa

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