KEGG   Shewanella oncorhynchi: RA178_09235
Entry
RA178_09235       CDS       T09381                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
sog  Shewanella oncorhynchi
Pathway
sog01501  beta-Lactam resistance
sog01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:sog00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    RA178_09235
   01503 Cationic antimicrobial peptide (CAMP) resistance
    RA178_09235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sog03036]
    RA178_09235
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sog02000]
    RA178_09235
   01504 Antimicrobial resistance genes [BR:sog01504]
    RA178_09235
Chromosome and associated proteins [BR:sog03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    RA178_09235
Transporters [BR:sog02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   RA178_09235
Antimicrobial resistance genes [BR:sog01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    RA178_09235
SSDB
Motif
Pfam: Beta-barrel_RND_2 YknX_C BSH_RND BSH_CzcB Beta-barrel_RND RND-MFP_C CzcB_C BSH_LcnD HH_EMRA DUF7801 BSH_YknX
Other DBs
NCBI-ProteinID: WMB74755
UniProt: A0AA50Q8D4
Position
2046110..2047192
AA seq 360 aa
MKKIILIIAILAAAWFGYQAMQPQEIAAAQIKLIPNVVIATAAMAPIRDEVEAIGSNKAT
ESVTITPKVTDMVIALKFDDGDIVKKGELLVQLQNAEQIAKVKAAQVKVSDNQRELARIS
SLVTSRTVAELERDRLQTLIDTTRAELEQAQSSLNDRSILAPFNGRLGLRQISVGSLVSP
GTVITTLDDISTIKLDFSVPERFIQDLEPGKKVEAKAVAFPDVTFKGVVTSIDSRVNPTT
RTVIVRAEIPNPELRLLPGMLMKVKLIKRSREALMLPESAIIPIQNSHYVYSVNADKVIE
RKQVTIGIRTRGWVEILDGLALGENVVIRGLLKVHPGDKVQTEFAEKFSYLADTNAEPSV
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgaaaaaaattattctaataatcgccatattggccgcggcatggtttggataccaagcc
atgcaaccgcaagagattgctgcagcccagattaaactcatacctaatgtggtgattgcc
actgccgctatggcgcccattcgcgatgaagttgaagctattggtagcaataaagccaca
gaatctgtaacgataacgcctaaagttaccgacatggtgatagcgcttaaatttgacgac
ggcgatatcgttaaaaagggcgagttattagtccaactgcaaaatgctgagcagatcgct
aaggttaaagccgcgcaagtcaaagtcagtgataatcaacgtgaattagctcggatcagt
tcgttggtgactagccgcactgtggccgagttagaacgcgacagattacaaacccttatt
gataccacccgtgccgagctcgaacaggcacaatcatcactcaatgatcgcagtattctg
gcgccttttaatggccgtttaggtttacgtcaaatcagtgtgggcagcttagtgtcgccc
ggcactgtgattacgacattggatgatatttctaccattaagctcgatttttcagtgcca
gagcgctttattcaagatttagagccaggtaaaaaggttgaagccaaagcggtcgctttc
cctgatgtgactttcaaaggtgtggtgacatcgattgatagccgcgtgaatccaaccacg
cgcacagtgatcgttcgcgccgaaatccccaatcctgagctgcgtttattaccgggcatg
ttgatgaaggttaaactcatcaagcgtagccgcgaggccttgatgttgcctgaatctgcc
attatcccgatccaaaacagccattatgtttacagcgtcaatgctgacaaggtgattgaa
cgtaaacaagtcactattggtattcgcactcgtggctgggtggagatcttagacggttta
gccttgggcgaaaacgtggtgatccgcggcttactgaaagttcatcctggggataaagtg
caaactgagttcgcggaaaagtttagttatcttgccgatacgaacgcggagccaagtgta
tga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (13)   

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