KEGG   Solanum tuberosum (potato): 102594664
Entry
102594664         CDS       T02981                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102594664
Spliceosome [BR:sot03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102594664
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102594664
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 102594664
NCBI-ProteinID: XP_015160907
Position
Un
AA seq 775 aa
MEKDLSENRHRRRRNDEDVKKVERQRHRDRSSSDDDDDERGDSRARRRVIERENGDDGRG
DRRARRRTIEHESGDDDGGGGNNGRDDRRLSRRRTERGTRDDSDDGSKRKSQRDEREDSA
ERGDRRSKEEQEEEDDDGDRDKTRERRRKSERVDDDEKDDRRERRRRNDREDDAGRDDRR
QRRPKDGSEEDDERRDGRKESRKNVSQVDEDVERDDRSRRKRRHEGEAGDVKDDRKEMSR
RNGDERNDRKEKKQRESDDEKVQKRREGRVERYNYGREGDRKEKRRNVEREKKDDGDDHD
RKDTRQRVGADKHGKEKNREDNTQEDGALKASEVSKVQKQDGNLNVDTAKLGRSGGVYIP
PFKLARMMKEVQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRG
LFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQLLA
AVKFIAHLVNQQIVHELIALELLTVLLEKPTDDSVEVAVGFVTECGSMLQDLCPRGLHGI
FERFRGILHEGEIDKRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDT
IDPEITLGMSVLPANSSSLGTSITTEIWVEILKLNLCVCSGNVIEKNMQMELCIMLLECC
SQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGT
DALPWHALAYIRLTEEDTTSSSRIFIKILFQEMSEHLGIRLLNERLNDPTMNTTR
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggagaaggatttgagtgagaatagacatcgtaggagaaggaacgatgaggatgtgaag
aaagtcgagcggcaacggcatagggatagaagcagttcggatgatgatgatgatgaaaga
ggtgatagtagggcgaggaggcgagtaattgaacgtgaaaatggtgatgatggaaggggg
gataggagggcgaggaggcgaacaattgaacatgaaagtggtgatgatgatggtggtggt
ggtaataatggaagggatgataggaggttgtcgaggcgaagaactgaacgtggaactagg
gatgatagtgatgatggttcgaagcggaagagtcaaagagatgaacgggaagatagtgct
gaaaggggtgataggaggtcaaaagaagaacaggaagaagaagatgatgatggtgacaga
gataaaacgagggagaggaggagaaaaagtgaacgggttgatgatgatgagaaggatgat
aggagggagagaagacgaagaaatgaccgtgaagatgatgctggaagggatgacagaaga
cagaggaggccaaaagatggaagtgaagaagatgatgaaaggagggatggtaggaaggaa
agcagaaaaaatgtaagccaagttgatgaggacgttgaaagggatgataggagtaggagg
aaacgaagacatgaaggtgaagctggtgatgtaaaagatgataggaaggagatgagtcga
aggaatggagatgaaagaaatgataggaaggagaagaagcaacgtgagtctgatgatgaa
aaggtgcaaaagagaagggagggtagggttgaaaggtataattatggtagagaaggggat
aggaaagagaagaggaggaatgtagaaagagaaaagaaggatgatggtgatgaccatgat
agaaaggatacaaggcaaagggttggggctgataagcatggaaaagagaaaaatagggaa
gataatacccaagaagatggggcactgaaagccagtgaggtttccaaggtgcaaaagcaa
gatggtaatttgaatgtcgatacagcaaaattgggcaggagtgggggagtgtacattcca
ccattcaaattggctaggatgatgaaggaggttcaggacaagagcagtgttgagtaccag
aggatgacttgggatgctctgagaaagagtatcaatggactggtgaataaagttaatgca
gcaaacctcaaaaacataattccagagttgttcgcagagaatttaattcgagggaggggt
ctgttttgtagatcctgtatgaagtcccaaatggcttctccgggttttactgatgtgttt
gctgctttggttgcggtcgttaataccaagttccctgaagtgggtgatcttttgttaaga
aggatcatactgcagctgcaaagagcttataaacgtaatgataagcctcagctgttagca
gctgtcaaatttattgctcaccttgtgaaccaacaaatcgtccacgagcttattgctctt
gaactactcacggttttgttggagaaacctactgatgatagtgttgaggttgcggttggt
tttgttacagaatgtggttcaatgcttcaggacctctgtccacgaggattacatggaatc
tttgagcggttccgtggtatacttcatgaaggagaaatagataaacgtgttcagttctta
attgaaagcctctttgcattgcgtaaagcaaagtttcagggttaccaagctgtgcgtcca
gaacttgaccttgttgagcaggaagatcaattaacacatgaagtttctctctcagataca
atagatccagaaattactttaggtatgtcagttcttccagcaaatagtagttctcttgga
acatccatcacaacagaaatatgggtcgaaattttgaaattgaacctttgtgtctgctct
gggaatgttatagaaaagaatatgcagatggaattgtgcataatgttattggagtgctgc
agtcaggagaggacttatcttcgttactatggactactgggacagcgattttgcatgatt
aacaaaattcatcaagaaaactttgagaaatgctttgtgcagcagtactccatgatccac
cggctcgaaactaataaacttcgtaacgtggccaagttttttgctcatttgctcggcact
gatgctcttccttggcatgctttggcttatataaggctgacagaggaggacacaacctct
tcttctcgtatatttattaaaatcctattccaggaaatgtcggagcaccttggcatccgc
ttgttgaatgagcgtcttaacgaccccaccatgaatactactcgataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system