KEGG   Solanum tuberosum (potato): 102598003
Entry
102598003         CDS       T02981                                 
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
  KO
K10590  E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]
Organism
sot  Solanum tuberosum (potato)
Pathway
sot04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    102598003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sot04121]
    102598003
Enzymes [BR:sot01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     102598003
Ubiquitin system [BR:sot04121]
 Ubiquitin ligases (E3)
  HECT type E3
   102598003
SSDB
Motif
Pfam: HECT TPR_TRIP12_N ARM_ARMC5 HEAT_EZ
Other DBs
NCBI-GeneID: 102598003
NCBI-ProteinID: XP_006359694
Position
Un
AA seq 1895 aa
METRSRKRAEATSSAPSSSSSGPTTRAAKRARVTAVSTSTSTVNSTPVAPTASISTRSRI
TTRSQDSLASSTPMDSTHESSGSASRNRRGKNPSHGSDKDNLDKGKEKEHEVRVRDRERD
REAERILGLNIDSGGAGEDDDNDSEGGVGILHQNLNSASSALQGLLRKLGAGLDDLLPSS
GMGSASSSHQSGRLKKILAGLRADGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPV
LVGLLNHENNPDIMLLAARALTHLVDVLPSSCAAVVHYGAVSCFVARLLTIEYMDLAEQS
LQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALATAANMCKKLPSDASDFVME
AVPLLTNLLQYHDAKVLEHASICLTRIAEAFASYPEKLDELCNHGLVTQAASLISTSNSG
GGQASLSTSTYTGLIRLLSTCASGSPFGAKTLLLLGISGILKDILSGSDLVATVSISPAL
SKPPEQIFEIVNLANELLPPLPQGTISLPTGTNLLIKGSAIKKSSASGSTKQEDMNPSSQ
EVSAREILLNDQPELLQQFGMDLLPVLIQVYGSSVNSPVRHKCLSAIGKLMYFSSANMIQ
SLNNVTNISSFLAGVLAWKDPQVLVPALQVAEILMEKLPGIFAKMFVREGVVHAVDALIL
SPSHGSSTSQPSSAEKDNDCIPGSSRSRRNRRRGSNLNADASSIEDPKSTVPGSGSPPNS
LEIPKTSSNLRIAVSAGAKSFKDKYFPSDSGATEVGVTDDLLRLKNLCMKLNAGVDEQIS
KPKGKSKASVPRLGDISASKEDTLAELVASMLGELSKGDGVSTFEFIGSGVVAALLNYFT
CGYFSKERISDTNLSRLRQQALRRYKSFIAVALPSSVGGNMVPMTVLVQKLQNALSSLER
FPVVLSHSSRSSTGNARLSSGLSALSQPFKLRLCRAQGDKTLRDYSSNVVLIDPLASLAA
IEDFLWPRVQRVESGQKALASVGNSESGTTAAGVGASCPATSTPASGSRRTRSRSAVNIN
DGAKKEPPQEKNGSSSKGKGKAVLKPAQEDGRGPQTRNAARRRAALDKEAEVKPVNGESS
SEDDELDMSPVEIDDALVIEDEDISDDDEDDHDDVLGDDSLPVCMPDKVHDVKLGDSSED
SPATQTPNDNQTNAAGGSSSRAASAQGSDSVEFRSGSSYGSRGAMSFAAAAMAGLASANG
RGLRGARDRHGRPLFSTSDPPRLVFSAGGKQLNRHLTIYQAIQRQLVLDEDDEERYGGTD
FLSSDGSRLWGDIYTITYQRADSQAERSTKGDGSSTSTKSNKASSSASASASADPSLHRA
SLLDSILQGELPCDMEKSNSTYNILALLRVVEGLNQLAPRLRVQSVIVDFSEGKILSLDE
LNTTGVKIPSDEFVNSKLTPKLARQIQDALALCSGSLPSWCSQLTRSCPFLFPFETRRQY
FYSTAFGLSRALYRLQQQQGADGNGSTNEREVRVGRLQRQKVRVSRNRILDSAAKVMEMY
SSQKAVLEVEYFGEVGTGLGPTLEFYTLLSRDLQKVGLRMWRTSSSSSVHSMEVGVDEKL
SGGDKELVQAPLGLFPRPWSSTVETADGNQFPKVIEYFRLLGRVMAKALQDGRLLDLPLS
TAFYKLVLGQELDLYDILSFDAELGKTLQELQALVSRKQNLESIGGQGQENINDLHFRGI
PVEDLCLDFTLPGYPEYVLKAGNDNVDLCNLEEYVTLVVDATVRTGIGRQMEAFRSGFNQ
VFEISALQIFSPTELDYLLCGRKELWKAETLVDHIKFDHGYTAKSPAIDYLLEIMGEFTP
EQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKHSSSASNTAPNGNMPSESADDDLPSVM
TCANYLKLPPYSTKEIMYKKLLYAINEGQGSFDLS
NT seq 5688 nt   +upstreamnt  +downstreamnt
atggaaactcggagccggaagcgggcggaggccacctcatcagcgccttcttcttcttcc
tctggtccaaccacccgcgccgctaagagagcccgtgtcaccgccgtttctacttctact
tccaccgtcaattccactcccgttgccccaactgcatcgatctcaactcgttctcgcatc
acaactcgttctcaggactcactagcatcttctacacccatggactccacccatgaatct
tctgggtcagctagccgaaaccgccgtggtaagaaccctagtcatggttccgataaggat
aatttggataaaggtaaggagaaagagcatgaggttagagttagggatagagaaagggat
agggaagccgagcggattcttggattgaacatagattctggtggtgctggtgaggacgat
gataatgatagcgagggtggtgttgggattttgcaccaaaatttaaattcagcaagtagt
gcacttcagggactgcttaggaaattgggtgctggattggatgatttgctccctagctct
ggaatggggtcggcatcatcatcccaccaaagtggccggctcaagaagatattagctggt
ttaagggcggatggggaggaaggaaaacaggttgaagctttgactcagctgtgtgagatg
ctatccattggaacagaagactccctgtccacattttctgtggactcatttgtaccggta
cttgtaggactgctcaatcacgagaacaatcctgacattatgcttcttgcggcccgtgct
cttacccatttggttgacgttctaccttcttcctgtgctgctgttgtccattatggagct
gtttcatgctttgtagctcgcctgcttacaattgaatacatggacttggctgaacagtct
ttgcaagctctaaagaagatctctcaggaacacccaactgcttgtttgagggctggtgct
ctgatggctgtgctttcttatctcgatttcttttctactggtgttcagagagtagcattg
gcgactgctgctaatatgtgcaagaagcttccttcagatgcgtctgactttgtcatggaa
gctgttcctctcttaacgaatcttctccaatatcatgatgcaaaggtattagagcatgct
tctatctgcttgacccgtattgctgaagcatttgcgtcatacccagaaaagcttgatgaa
ctttgcaatcacggacttgttacccaagctgcatccctcatctcaaccagcaactctgga
ggtggacaggcttcactcagcacgtcaacctacacaggtttaatcaggctactttcgaca
tgtgctagtggctctccgtttggagctaaaaccttactgctgcttggaataagtggaata
ctcaaggatattctatcaggttccgatcttgtggccacggtgtctatttcacctgccttg
agcaaacctccggaacagatttttgagatcgtgaacctggcaaatgagctccttcctccg
ctgcctcaaggaaccatctctcttccaaccggcactaatctgctcattaaaggttctgct
ataaagaaatcatctgctagtggttctaccaaacaggaggatatgaatccatcttcccag
gaggtttcagctcgagaaatattgttgaatgatcaacctgaacttctgcaacaatttgga
atggatcttcttcctgttctgatccaggtatacggatccagtgtgaatagtccagttcgc
cacaagtgcctctcagctattggaaaacttatgtatttcagcagtgcaaatatgattcaa
tctctaaataacgtcactaacatatcgagtttcttggctggagtattggcctggaaggat
cctcaagtgctggtgcctgctcttcaagtagcagaaattctaatggaaaagcttcctgga
atctttgccaagatgttcgtgcgagaaggtgttgttcatgccgtagatgctctgatattg
tctccctcccatggttcttctacttcccagccatcttctgctgagaaggacaatgattgt
atacccgggtcatctcgttctagacgtaaccgacgtcgtggcagtaatttaaatgcagat
gcaagttccattgaggatcctaaaagtacagttccagggagtggatcaccaccaaattca
ctggaaataccaaagaccagttctaaccttcggattgcagtcagtgcaggtgccaaatct
ttcaaagataaatacttcccttcagattctggggctactgaggttggtgttacagatgat
cttttacgattgaagaatctctgtatgaagttgaacgctggtgttgatgaacaaatatct
aaacctaaaggaaaatcaaaagcttctgttcctcggcttggggatatttctgccagtaag
gaagacaccttggccgaactggtagcttccatgctgggggagctcagcaaaggggatggt
gtatcaacttttgagttcattggaagtggagttgttgcagctttgctgaactattttaca
tgtggatatttttcgaaggaaagaatctcagatactaacttgtctaggcttcgacaacaa
gcactcagaagatacaagtcttttattgcagttgcccttccgtccagtgtaggtgggaat
atggttcctatgactgttttggttcaaaaacttcaaaatgctttgtcttccttggagagg
ttccctgttgtgctgagtcattcttcaagatcatctactggaaatgcacgactttcttca
ggtttaagtgctttgtcacaaccatttaagctacgcctttgcagagctcaaggagacaag
accctccgtgactactcttcaaatgttgtgttgatcgatcctttagcaagtctagcggct
attgaagactttctgtggcctcgagttcagagagttgagtctggtcaaaaggccttggca
tcagtaggcaactctgagtctgggaccaccgctgcaggggttggtgcttcatgcccagcg
acctctactccggcttctggatctcgtcgtacacgatctaggtcagcagttaatataaat
gatggtgcaaagaaagaaccaccacaggaaaaaaatggaagttcatccaagggcaaagga
aaggctgttctgaagcctgctcaagaagatggcaggggaccccagacaagaaatgctgct
cgaagacgagcagcattggataaagaagcagaagttaaacctgtgaatggggaatctagt
tctgaggatgatgagttggatatgtcacctgttgaaattgatgacgctttggttattgag
gatgaagatatatctgatgatgatgaagatgaccatgatgatgtgttgggcgatgattct
cttcctgtttgcatgccggacaaagttcatgatgtcaaattgggtgattcttcggaagat
agtcctgccacacagacgccaaatgataaccagacaaatgctgctggtggttcaagcagc
agagctgcttctgctcagggatctgattctgttgagttcaggagtgggagttcttatggt
tcaaggggtgcaatgtcatttgctgcagctgccatggctggacttgcatctgcgaatggt
agaggtttgagaggagctagagatcgtcatggacgccctctatttagcactagcgatcca
cccagacttgtattttctgcaggcggaaagcagcttaatagacacttgactatctaccag
gccatccagcggcaacttgtccttgacgaggatgacgaagagaggtatggtggcactgac
tttctgtctagcgacggaagcagactttggggtgatatttacactatcacataccaaaga
gctgacagccaagcagagaggtctacaaaaggggatgggagctcaacttccaccaagtct
aataaagctagttcttcagcaagtgccagtgccagtgctgatccctcattgcatcgagca
tcattgttagatagtatattacagggagaacttccttgtgatatggagaaaagcaattct
acttacaacattttggcccttttacgtgtagtagagggattaaaccagctggccccacga
ttacgtgtgcagtcggttattgttgatttttctgaaggcaaaatattgagtttagatgag
ctcaatactactggtgtcaaaattccctcggatgaatttgtaaacagcaagctcactcca
aagttggcccgacagatacaggatgctctagccctttgtagtgggtctcttccatcatgg
tgttcccagttgacaaggtcctgtccgtttctttttccatttgagactcggcgccagtac
ttctattcaacggcctttggattatctagggctttatatcggcttcaacagcagcaaggt
gcagatggtaatggatccaccaatgagagagaggtcagggttgggagactacagcgccag
aaagttcgtgtctctaggaatcgcattctggattctgctgcaaaagtaatggagatgtac
tctagccaaaaagctgttctcgaggtcgaatattttggtgaagttggcactggtttgggc
ccaactctggaattctataccctgttaagtcgcgatctgcaaaaagttggactgagaatg
tggagaacaagttcctcatcaagtgtacattcaatggaagtgggtgtggatgaaaaattg
agcgggggtgataaagagcttgtccaagcacctcttggattattcccacgtccctggtca
tcaactgttgaaactgcagatggcaaccaattcccgaaagtgattgaatatttcagattg
ctagggcgtgtgatggcgaaagcacttcaagatggacggcttttggatctccctctgtca
actgcattttacaagcttgttcttggccaagagcttgatctgtatgatattctttctttt
gatgctgagttaggcaaaactttgcaagagttgcaagctcttgttagccgtaaacaaaat
ctagaatcaattggaggccagggacaagagaacattaatgatttgcattttcgtgggatc
ccagttgaggatctttgtttagacttcacactcccaggctatcctgaatatgttctgaaa
gcaggcaatgataatgttgatctttgtaacttggaagaatatgttactttggtagttgat
gccactgtgaggactggaattgggcggcagatggaagcttttagatctggcttcaatcag
gtttttgagatttcagctctgcaaatattctctcctactgagttggactacctgctttgt
ggtcgtaaagagttatggaaggctgagacgcttgtagatcatatcaagtttgatcatgga
tatacagccaagagtcccgccatcgattatttattagagatcatgggagagttcactcct
gagcagcaacgagcattctgtcagttcgtgactggtgctccccggcttcctccaggtggt
ctggccgtgctcaatcctaagttgacaatagtgagaaagcattcatctagtgctagcaat
acagcaccaaatggtaatatgccatcagaatctgcagacgacgacttacctagtgtgatg
acatgtgctaactacctgaaactgcctccctattctacaaaggaaataatgtacaaaaag
ttgctctatgctatcaatgaaggtcaaggatcatttgatttgtcgtaa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (11)   

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