KEGG   Solanum tuberosum (potato): 102602792
Entry
102602792         CDS       T02981                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102602792
Spliceosome [BR:sot03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102602792
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102602792
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 MIF4G_like FAM176
Other DBs
NCBI-GeneID: 102602792
NCBI-ProteinID: XP_006342939
Position
Un
AA seq 516 aa
MEESLEYQKKSWIALKKSINGLLNKINKANIKHIIPELFEENLIRGKGLFCRSIMKSQLN
SAIFTDVFAALIAVVNTKFPQIGELLCKRIILQLRRAYNNNNKPQMLASVKFIGHLVNQQ
VVHELVALELVTLLLEKPTDDSVDVAVGFVKECGSMLQDLCPLGLHAIFERFRGILHEGE
IDKRVQFLIEDLFALRKHKFQPAVPPELDLVEEEDRLTHEISLGDKVDEQIELDVFKPDP
NFVENENKYEQLQKRILGGGDQDEDSEDDDESKDEDEQQMEIEDETETNLINLRRTIYLT
IMSSAEFEEAGHKLLKIRLEPGQEMELCIMLLECCSQEKTSLHYYALLGQRLCMINKVHQ
KNFEKSFMQQYSMIHQLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDTTSSSRIF
IKNLFQELSGHLGIRMLNERLSDPSMQELFESIFPKDSPKNMRFAINFFTSIGLGGITEN
LRDYLKNMPRLILQQDKRVSRSSESVDDRPRKRRRS
NT seq 1551 nt   +upstreamnt  +downstreamnt
atggaagaaagcctagagtaccaaaagaagagttggattgctctaaaaaagagcataaat
gggctgctcaataaaatcaataaagccaacataaaacacatcattcctgaattgtttgaa
gagaatttaattcgtggtaagggcttgttttgcagatcaattatgaaatcacaattgaat
tctgctattttcacagatgtttttgcagcattgatagccgttgttaacacaaaattccca
caaattggtgaacttctgtgtaagaggatcattctgcaattgcggagggcctataacaat
aataataaacctcagatgttagcatctgtaaaatttattggtcatcttgtcaatcagcaa
gttgttcacgaacttgtggctttggaattagttactcttttactcgagaaacctactgat
gatagtgttgatgttgccgttggtttcgttaaggaatgtggttcgatgcttcaggatctg
tgtcccttagggttgcacgctatttttgagagattcagaggaatacttcatgaaggagaa
atagataaaagggttcagttcttaattgaagacctttttgcattgcggaaacacaagttt
cagccagctgttcctccagaacttgaccttgttgaggaggaagatcgattaacacatgaa
atctctctcggagacaaagtggacgagcaaattgaattggatgttttcaagccggatcct
aattttgttgaaaatgaaaataagtatgaacaactacagaagaggattctaggtggtggt
gatcaggacgaagattctgaggatgacgacgaatctaaggacgaggacgagcaacagatg
gaaattgaagatgagacagagacaaacttgatcaatcttcggaggacgatttacttaacg
attatgtcaagtgctgagtttgaagaagcagggcacaagctgttgaaaatcagactagag
cctggtcaggagatggagttatgcataatgttattggagtgctgcagtcaggagaagact
tctctccattactatgcacttctggggcagcggctatgcatgatcaacaaagttcaccag
aagaattttgagaaatcattcatgcaacaatactcgatgatccaccaacttgaaactaat
aaactgcgtaatgtggcaaagttttttgctcatttactaggcactgatgcactgccttgg
catgttttggcttatttaagattgacagaagaggatactacatcttcttctcgtatattc
atcaaaaatttattccaggagttgtcagggcaccttggcatccgtatgctgaatgagcgt
cttagtgacccctctatgcaagagttgtttgagtcaatatttccaaaggatagtcctaaa
aatatgaggtttgctatcaacttcttcacatccattggtctgggtgggataactgaaaat
ctgcgagactatctgaagaacatgccaaggcttatcttgcagcaagacaaacgtgtttcc
agatcaagtgaatcagttgatgatcgtccaaggaagaggaggagaagttag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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