KEGG   Solanum tuberosum (potato): 102605163
Entry
102605163         CDS       T02981                                 
Name
(RefSeq) pre-mRNA-splicing factor cwc22-like
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sot  Solanum tuberosum (potato)
Brite
KEGG Orthology (KO) [BR:sot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102605163
Spliceosome [BR:sot03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102605163
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102605163
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Utp14
Other DBs
NCBI-GeneID: 102605163
NCBI-ProteinID: XP_006364611
Position
Un
AA seq 513 aa
MEESVEYQKKSWIALKKSINGLLNKTNKANIKYIIPELFGENLIRGRGLFCRSIMKSQLN
SPIFTDVFAALVAVINTKFPQIGELLCKRIILQLQRAYYSNNNNKPQMLATVKFIAHLVN
QQVVHVLIALELVTLLLDKPTDDSVDVAVDFVKECGSILQDLCPLGLHGVFERFRGILHE
GEVDKRVQFLIEDLFALRKHKFQLAVPPELDLVEEEDQLTHEISLGDEVDPQIELDVFKP
DLNFVQNENKYEELQKRILGGGDQDEESEDDDESDDEDEQIEDETETNLINLRRTIYLTI
MSSADFEEAGHKLLKIRLEPGQETELCIMLLECCNQEKTFLNYYALLGQRLCMINKVHQK
NFENSFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDTTSSSRIFI
KILFQELSGQLGINTLNDRLSDPSMQESFESIFPKDSPKNTRFAINFFISIGLGGITENL
RNYLKNMPRQQDKRVFRSSESDDVHQSKRRRRS
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggaagaaagcgttgagtaccaaaagaagagttggattgctctaaaaaagagcatcaat
ggactgctcaataaaacgaataaagccaacataaaatacatcattcccgaattatttggg
gagaatttaatccgtggtaggggcttgttttgcagatcaattatgaaatcacaattgaat
tctcctattttcaccgatgtttttgcagcattggttgctgttattaacacgaaattccca
caaattggtgaacttttgtgtaagaggatcattctgcaattgcaaagagcttattatagc
aacaataataataaacctcagatgttagcaactgtaaagtttattgctcatcttgttaat
cagcaagttgttcatgtacttatagctttggaattagttacacttttactcgataaacct
accgatgatagtgttgatgttgctgttgatttcgttaaggaatgtggttcgattcttcag
gatctgtgtcccttagggttgcacggtgtttttgagcgatttcgaggaatacttcatgaa
ggggaagtagataaaagggttcagttcttaattgaagacctttttgcattgcgaaaacac
aagtttcagctagctgttcctccggaacttgaccttgttgaggaggaagatcaattaaca
catgaaatctctcttggagacgaggtagacccgcaaattgaattagatgttttcaagcca
gatcttaattttgtccaaaatgaaaataagtatgaagaattacaaaagaggattctagga
ggtggtgatcaggatgaagaatctgaggatgatgatgaatcagatgacgaggacgagcaa
attgaagatgagacagagacaaacttgatcaatcttcgaaggacgatttacttaactatt
atgtcaagtgctgattttgaagaagcagggcataagctgttgaaaatcagactagagcca
ggtcaggagacggagttatgcataatgttattagaatgttgtaatcaggagaagactttt
ctcaattactatgcacttttggggcagcggttatgtatgatcaacaaagttcaccagaag
aatttcgagaactcattcgtgcaacaatactcaatgatccatcgacttgaaactaataaa
ctgcgtaatgtagcaaagttttttgctcatttacttggtactgatgcattgccttggcat
gttttggcttatttaagattgacagaagaggacacaacatcttcttcacgtatattcatc
aaaatcttattccaggagttgtcagggcaacttggcatcaatacattgaatgatcgtctt
agtgacccatctatgcaagagtcgtttgagtcgatatttccaaaggatagtcccaaaaat
acgaggtttgctatcaacttcttcatatccattggtctaggtgggataactgaaaatctg
cgaaactatctgaagaacatgccaaggcagcaagacaagcgtgttttcagatcaagtgaa
tcagatgatgttcatcaaagtaagaggaggaggagaagttag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (9)   

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