KEGG   Solanum pennellii: 107007104
Entry
107007104         CDS       T04130                                 
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
spen  Solanum pennellii
Pathway
spen03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spen00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107007104
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spen03019]
    107007104
Enzymes [BR:spen01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     107007104
Messenger RNA biogenesis [BR:spen03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     107007104
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Tmemb_9
Other DBs
NCBI-GeneID: 107007104
NCBI-ProteinID: XP_015061061
UniProt: A0ABM1FSE8
Position
12:80836066..80842914
AA seq 649 aa
MFSFYANLNSGNLAGLFHLIVLVLHFISPTNNNNNILSLMVSSESLSESVAPPTMKYGIT
KPLSLAGPTEADLQRNAELEKFLRESELYESEEETARREEVLRRLDQIVKQWVKQLTRQR
GYIDQMVEDANAIIVTFGSYRLGVHGPGADLDTLCVGPCYVNREEDFFILLHDILAEMEE
VRELQPVPDAHVPVMKFKFQGISIDLLYASITLLVIPEDLDISDQSVLCNVDGPTVRSLN
GCRVADRILKLVPNAKMSEVLGQKTWCLFQCEFLVPRTISVVTGFLGGVNWALLVARICQ
FYPNAIPSMLVSRFFRVYTQWRWPNPVMLCPIEEDELGFLVWDPRKNPKDRTHHMPIITP
AYPCMNSSYNVSPSTLRVMMDQFQIGNKICEDVELNKSQWPSLFEHYFFFEAYKNYLQVE
IVAADNDDLLAWKGWVESRLRQLTLKIERDTNGTLQCHPYPNEFADMSKPCPHCAFFMGL
QRQKGVKVQEGQRFDIRGTVDEFKQDVNMYSYWIPGMDIYISHVPRREIPAYVFPDGYKR
PRQSRNTTQHTPEKDAKGCMSSEGRRSKRKQETHTVDVESDKLPKRASISPQNIGSVSPA
SVSSRTGGSSQMIIPEESLQEVKTAGLQNQSSDDKSTEDTGEQKPCISE
NT seq 1950 nt   +upstreamnt  +downstreamnt
atgtttagcttttatgctaatttgaattctggtaacttggctggcctttttcatttgatt
gttctggttctgcatttcatcagtccaacaaacaacaataacaacatactcagtttgatg
gtgagttccgagagcttaagtgagtctgttgcaccaccaacaatgaaatatggtatcaca
aagccattatctcttgctggaccgactgaggcagatcttcaaagaaatgcagaactggaa
aagtttttgagggaatcagaattgtatgagagtgaggaagagactgcaaggagagaagaa
gtactgcggcgacttgaccagattgtaaaacaatgggtgaaacaattgactcgccagaga
ggctacatagatcaaatggttgaggatgcaaatgctatcatagtcacctttggctcttat
cgtctaggggttcatggaccaggagctgacctggacacattgtgtgttggtccctgctat
gtcaatcgagaagaagatttctttatccttcttcatgatattttagctgaaatggaagaa
gttcgtgaacttcaaccagttcctgatgctcatgtccctgttatgaaattcaaatttcaa
gggatttcaattgatcttctttatgcaagtataactctcttggttattcctgaagatttg
gatatctcagaccaatctgtactctgtaatgtggatggaccaactgttcgaagtctgaat
ggttgtcgagttgctgatagaatactgaaactagttcccaatgctaagatgtctgaagtt
ctgggccaaaagacgtggtgtttattccaatgtgagttcttagtccctcgaaccatctca
gtggttactggatttcttggtggggtgaattgggctcttttggttgctcgcatttgccag
ttttacccaaatgcaatccctagtatgcttgtttctaggttcttccgtgtttatacacaa
tggcgttggccaaatcctgtgatgttatgcccaatagaagaggatgaacttgggtttctt
gtttgggatccgcgcaagaatcctaaagacagaactcatcatatgccaatcatcactcct
gcctacccttgcatgaactctagctataacgtctcaccaagcactcttcgagtaatgatg
gaccaatttcagattggtaacaagatttgtgaggatgtggagttgaataaatcacagtgg
ccttctctttttgagcattactttttctttgaggcgtacaaaaactatctccaggttgaa
atcgtggcagcagataatgatgatttgctagcttggaaaggctgggtggaatcacggctt
cgacaactcacgctaaagatagagcgggataccaatgggacgttgcagtgccatccttat
cctaatgaatttgcggacatgtcgaagccatgcccgcattgtgcttttttcatgggtttg
cagaggcaaaagggtgtcaaagtacaagaaggtcaacggtttgatatccgtggaacagtc
gatgagtttaagcaagatgtaaacatgtactcttattggataccgggcatggatatctat
atctcgcatgttcctaggagggaaattcctgcttatgtctttcctgatgggtataagaga
ccacgtcaatctagaaatacaactcagcatactcccgagaaagatgccaaaggttgcatg
tcttctgaaggaaggcgttcaaagaggaagcaggaaacccatacagttgatgtagagtcc
gacaaactgccgaaacgtgcttctattagtcctcaaaatataggatctgtttctcccgca
agtgtttctagtcggacaggcggatcatcacagatgatcattcccgaggagtcactccag
gaggttaagactgctggccttcaaaaccaaagttctgatgataaatcaacagaggatact
ggggagcagaaaccatgcatttctgagtga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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