KEGG   Solanum pennellii: 107014972
Entry
107014972         CDS       T04130                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107014972
Spliceosome [BR:spen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107014972
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107014972
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 Phage_rep_org_N MULE MIF4G_like
Other DBs
NCBI-GeneID: 107014972
NCBI-ProteinID: XP_015070595
UniProt: A0ABM1GG16
Position
3:74666896..74669167
AA seq 520 aa
MEESLEYQKKSWIALKKSINGLLNKINKANIKHIIPELFEENLIRGRGLFCRSIMKSQLN
SVIFTDVFAALIAVVNTKFPQIGELLCKRIILQLRRAYNNNNKPQMLASVKFIGHLVNQQ
VVHELVALELVTLLLEKPTDDSVDVAVGFVKECGSMLQDLCPLGLHAIFERFRGILHEGE
IDKRVQFLIEDLFALRKHKFQPAVPPELDLVEEEDRLTHEISLGDMVDEQIELDVFKPDP
NFVENENKYEQLQNRILGGSDQDEESDLLVGGDQYEDESEDEDEQEMQIEDETETNLINL
RRTIYLTIMSSGGFEEAGHKLLKIRLEPGQEMELCIMLLECCSQEKTFLHYYALLGQRLC
MINKVHQQNFERSFMQQYSMIHQLETNKLRNVAKFFAHLLGTDALPWHVLAYLRLTEEDT
TSSSRIFIKILFQELSGHLGIHKLNERLSDPSMQESFESIFPKDNPKNVRFAINFFTSIG
LGGITENLRDYLKNMPRLILQQEKRVSRDDDRPRKRRRRS
NT seq 1563 nt   +upstreamnt  +downstreamnt
atggaagaaagcctagagtaccaaaagaagagttggattgctttaaaaaagagcataaat
gggctgctcaataaaatcaataaagccaacataaaacacatcattcctgaattgtttgaa
gaaaatttgattcgtggtaggggcttgttttgcagatcaattatgaaatcacaattgaat
tctgttattttcacagatgttttcgcagcattgatagccgttgtcaacacaaaattccca
caaattggtgaacttttgtgtaagaggatcattctgcaattgcggagagcttataacaat
aataataaacctcagatgttagcatcggttaaatttattggtcatcttgtcaatcagcaa
gttgttcatgaacttgtagctttggaattagttactcttttactcgagaaacctactgat
gatagtgttgatgttgctgttggtttcgttaaggaatgtggttcgatgcttcaggatctg
tgtcccttagggttgcacgctatttttgagagattcagaggaatactacatgaaggagaa
atagataaaagggttcagttcttaattgaagaccttttcgcattgcggaaacacaagttt
cagccagctgttcctccagaacttgaccttgttgaggaggaagatcgattaacacatgaa
atctctctcggagacatggtggacgagcaaattgaattggatgttttcaagcccgatcct
aattttgttgaaaatgaaaataagtatgaacaactacagaataggattctaggtgggagt
gatcaggacgaagaatctgatcttctagttggtggtgatcagtacgaggatgaatctgag
gacgaggacgagcaagagatgcaaattgaagatgagacagagacaaacttgatcaatctt
cggaggacgatttacttaacgattatgtcaagtggtgggtttgaagaagcagggcataag
ctgttgaaaatcagactagagcctggtcaggagatggaattatgcataatgttattggag
tgctgcagtcaggagaagacttttctccattactatgcacttttggggcagcggttatgc
atgatcaacaaagttcaccagcagaattttgagagatcattcatgcaacaatactcgatg
atccaccaacttgaaactaataaactgcgtaatgtggcaaagttttttgctcatttacta
ggcactgatgcactgccttggcatgttttggcttatttaagattgacagaagaggatact
acatcttcttctcgtatattcatcaaaattttattccaggagttgtcagggcaccttggc
atccataagctgaatgagcgtcttagtgacccctctatgcaagagtcgtttgagtcgata
tttccaaaggataatcctaaaaatgtgaggtttgctatcaactttttcacatccattggt
ctaggtgggataactgaaaatctgcgagactatctgaagaacatgccaaggctcatcttg
cagcaagagaaacgtgtttccagagatgatgatcgtccaaggaagaggaggaggagaagt
taa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system