KEGG   Solanum pennellii: 107018086
Entry
107018086         CDS       T04130                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107018086
Spliceosome [BR:spen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107018086
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107018086
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 107018086
NCBI-ProteinID: XP_015073944
UniProt: A0ABM1GP70
Position
4:74805114..74811083
AA seq 959 aa
MERDLSENGHGRRRDKSEDEDSWKVERKKYEDRKTYGDREDRRERRRRTERRESDDDGEG
RRERRRMESGNRDGSDDKKDDWRGDEHGDGGGRMERRGKDGNKENDDERDDRKDRRRKNY
DDDDDKRESRKVETQVDERGDRRERRRRIERGESDDDGEDKDRDDRRTRRRRAERGNRDS
SDNEKDDLRRKRDGGEMMDVKQKDENKDDNDRRDRRRKHEQVNDDDKRESRKEETQVDDD
DEDERDDRRKKRRRHEGEGGDLKDDRKEKSRRNEGESDGRKERRRREDDDEKVHKRRKDE
HGHRDRVDRYNDGREGDKRGRKDVEREKRVDGDDNNRKDIRQRDGDDKHGKEKNRKDNAQ
EDGTFKANEDSKVQKQDANLPTDLAKLGRSGGVYIPPFKLARMMKDVQDKSSVEYQRMTW
DALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALV
AVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQLLAAVKFIAHLVNQQIVHELIALELLT
VLLEKPTDDSVEVAVGFVTECGSMLQDLCPRGLHGIFERFRGILHEGEIDKRVQFLIESL
FALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEIALDIFKPDPNFLENERKYE
ELKKAILGEESEEEGDSDAESEDEDEDEESDEEEDEEQMKIKDETETNLINLRRTIYLTI
MSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQE
NFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHCLAYIRLTEEDTTSSSRIFI
KILFQEMSEHLGIRLLNERLNDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITESL
REYLKNMPRLIMQQQKPVSDSEESGSSSGSESSESESESSSSSSEESDDSRRKQRKRRR
NT seq 2880 nt   +upstreamnt  +downstreamnt
atggagagggatttgagtgagaatgggcacggtaggagaagggacaaatcagaggatgag
gatagttggaaagtagagcggaaaaagtacgaagatagaaaaacttacggtgatagggag
gataggagggagagaaggcggagaactgaacgccgtgagagcgatgatgacggtgagggt
aggagggagagaagaagaatggaaagtggaaatagggatggcagtgatgataaaaaggat
gattggaggggagatgaacatggagatggtggtggaaggatggagaggaggggaaaagat
gggaataaggagaatgatgatgaaagggatgataggaaggatagaaggaggaaaaattat
gatgatgatgatgataagagggagagcagaaaagtggaaacacaagttgatgaaaggggg
gataggagggaaagaaggcggagaattgaacgcggtgagagtgatgacgatggtgaggat
aaagatagggatgataggagaacaagaaggcgaagagctgaacgtggaaatagggatagt
agtgataatgaaaaggatgatttgaggcgtaagagggatggtggtgaaatgatggatgtg
aagcaaaaagatgagaataaggacgacaatgataggagggatagaaggagaaaacacgaa
caggtgaatgatgatgataagagggagagcagaaaagaggaaacccaagttgatgatgat
gatgaggatgaaagggatgataggagaaagaagaggcgaagacatgagggtgaaggtggt
gacttgaaggatgataggaaggagaagagtcgaaggaatgaaggtgaaagcgatggtagg
aaggagaggaggcgacgggaagatgatgatgaaaaagtgcataagagaaggaaggatgag
cacggacacagggatagagttgatcggtataatgatggtagagaaggggataaaagaggg
aggaaggatgtagagagagaaaagagggttgatggtgatgacaataatagaaaggatata
aggcaaagggatggagatgataagcatggaaaggagaagaataggaaagataatgcacaa
gaggatgggacttttaaagccaatgaggattccaaagtgcaaaagcaagatgctaatttg
cctactgacttagcaaagttgggaaggagtggaggtgtttacattccgccattcaaattg
gctagaatgatgaaggatgttcaggacaaaagcagtgttgagtaccagaggatgacttgg
gatgctctgaggaaaagtatcaatgggctggtgaataaagttaatgcagcaaacctcaaa
aacattattccagagttgtttgcagagaatttgatccgtgggagagggctgttctgtaga
tcctgtatgaagtcccaaatggcttctcccggttttactgatgtatttgctgctttggta
gcagtggttaacaccaagttcccagaagtgggtgatctgttgctaagaaggatcatactg
cagctgcaaagagcttataaacgtaatgataagcctcagctgttagcagctgtcaagttt
attgctcaccttgtaaaccagcaaattgttcacgagcttattgctctcgaactacttaca
gttttgttggagaaacctacagatgatagtgttgaagttgcagttggttttgttacagag
tgtggttcaatgcttcaggacctctgtccacgaggattgcatggaatctttgagcggttc
cgtggtatacttcatgaaggagaaatagataaacgggttcagttcttaattgaaagcctc
tttgcattgcgaaaagcaaagtttcagggttaccaagctgtgcgaccagagcttgacctt
gttgagcaggaggatcaattaacccatgaagtctctctctcggatacaattgatccagaa
attgctttagatattttcaagccggatcctaatttcttagaaaatgaaaggaagtatgaa
gaattaaagaaggcaatacttggtgaagaatctgaggaagaaggagattcggatgcagaa
tcagaggatgaagatgaagatgaagagtccgatgaagaagaggatgaggagcaaatgaaa
ataaaggatgaaacagagacaaacttaatcaaccttcggagaacgatctacctgacgatt
atgtctagtgttgactttgaagaagcaggacacaagttgttgaagatcaaactagagcct
ggtcaggagatggagttgtgcataatgttattggaatgctgcagtcaggaaaggacttat
cttcgctactatggactactgggacagcgtttttgcatgatcaacaaaattcatcaggaa
aactttgaaaaatgttttgtgcagcagtactccatgatccaccggcttgaaactaacaaa
ctacgtaatgtggccaagttttttgctcatttgctcggcactgatgctctgccttggcat
tgtttggcttatatacggctgacagaggaagatacgacctcctcttctcgtatttttatc
aagattctattccaggagatgtcagagcatctaggtatccgcttgttgaatgagcgtctt
aacgaccccactatgcaagaatccttggagtctattttcccaaaagataatcccaagaat
acaaggtttgctatcaactttttcacttctatcggtttgggtggaattacggagagcctg
cgagagtatctcaagaacatgccaaggcttatcatgcaacaacagaagcctgtttctgat
tcagaggagtccggtagttcatctggttctgaatcttcagaatctgagtcggagtcatct
tcttccagttctgaggaaagtgatgatagtcgaaggaagcagaggaagaggagaagatag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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