KEGG   Solanum pennellii: 107028488
Entry
107028488         CDS       T04130                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spen03041]
    107028488
Spliceosome [BR:spen03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    107028488
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    107028488
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 107028488
NCBI-ProteinID: XP_015085054
UniProt: A0ABM1HG35
Position
8:150217..155737
AA seq 917 aa
MEKDLSDNRHCRRRNDEDVKKVERQRYRDRSSSDDDGGRGDRRARRRTIEHERGDDDDGG
GGGNNGRDDRRLSRRRTERGTRDDSDDDLKRKSQIDEREDSAEKGYRRLKEEQEEEEEED
EGDRDKTRERRRKSEQVDADEKDDRRERRLRNDREDDAGRDDRRQRRPKDGSEEDDERRD
GRKESAKNVSQVDEDVERDDRSKRKRRHESEAGDVKDDRKERSRRNGDERNDRKERSRNN
GDDWREKKQRESDDEKVQKRREGRVDRYNDGREGDRKEKSRNIEREKKDDGDANDTKDTR
QRIGADKHGKDNNREDNTQEDGALKASEVSKVQKQDVNLNVDTTKLGRSGGVYIPPFKLA
RMMKDVQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRGRGLFCRS
CMKSQIASPGFTGVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQLLAAVKFI
AHLVNQQIVHELIALELLTVLLEKPTDDSVEVAVGFVTECGSMLQDLCPRGLHGIFERFR
GILHEGEIDRRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLSDTIDPEI
TLDIFKPDPNFLENERKYEELKKAILGDESEEGDSDAESEDEDDNEDEESEEEDEEQMQI
KDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYL
RYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHA
LAYIRLTEEDTTSSSRIFIKILFQEMSEHLGIRLLNERLNDPTMQDSLDSIFPKDNPKNT
RFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKPVSESDDESGSESSGTESSSSNSDD
SDSESDDSRRKQRRRRR
NT seq 2754 nt   +upstreamnt  +downstreamnt
atggagaaggatttgagtgacaatagacattgtaggagaaggaacgatgaggatgtgaag
aaagttgagcggcaacggtatagggatagaagcagctcggatgatgatggcggaagaggt
gataggagggcgaggaggcgaacaattgaacatgaacgtggtgatgatgatgatggtggt
ggtggtggtaataatggaagggatgataggaggttgtcgaggcgaagaactgaacgtgga
actagggatgatagcgatgatgatttgaagcggaagagtcaaatagatgaacgtgaagat
agtgctgaaaagggttataggaggctaaaagaagagcaggaagaagaagaagaagaagat
gaaggtgacagagataaaacgagggagaggaggagaaaaagtgaacaggtagatgctgat
gagaaggatgataggagggagagaagactaagaaatgaccgtgaagatgatgctggaagg
gatgacagaagacagaggagaccaaaggatggaagtgaagaagatgatgaaaggagggat
ggtaggaaggaaagcgcaaaaaatgtaagccaagttgatgaggacgttgaaagagatgat
agaagtaagaggaaacgcagacatgaaagtgaagctggtgatgtaaaggacgatagaaag
gagaggagtcgaaggaatggagatgaaagaaacgataggaaggagaggagtcgaaacaat
ggagatgattggagggagaaaaagcaacgggagtctgatgatgaaaaggtgcaaaagaga
agggagggtagggttgatcggtataatgacggtagagaaggggataggaaagagaagagt
aggaatatagaaagagaaaagaaggatgatggtgatgccaatgatacaaaggatacaagg
caaaggattggggctgataagcatggaaaagacaataatagggaagataatacccaagaa
gatggggctctgaaagccagtgaggtttccaaggtgcaaaagcaagatgttaatttgaat
gtcgatacaacaaaattgggcaggagtgggggagtgtacattccaccattcaaattggct
aggatgatgaaggacgttcaggacaagagcagtgttgagtaccagaggatgacttgggat
gctctgagaaagagtatcaatggactggtgaataaagttaatgcagcaaacctcaaaaac
attattccagaattattcgcagagaatttaattcgagggaggggtttgttttgtagatcc
tgtatgaagtcccaaatagcttctccgggttttactggtgtgtttgctgctttggttgca
gtcgttaataccaagttccctgaagtgggtgatcttttgttaagaaggatcatactgcag
ctgcaaagagcttataaacgtaatgataagcctcagctgttagcagctgtcaaatttatt
gctcaccttgtgaaccaacaaatcgtccacgagcttattgctcttgaactactcacggtt
ttgttggagaaacctactgatgatagtgttgaggttgcagttggttttgttacagaatgt
ggttcaatgcttcaggacctctgtccacgaggattacatggaatctttgagcggttccgt
ggtatacttcatgaaggagaaatagatagacgtgttcagttcttaattgaaagcctattt
gcattgcgtaaagcaaaatttcagggttaccaagctgtgcgtccagaacttgaccttgtt
gagcaggaagatcaattaacacatgaagtctctctttcagatacaatagatccagaaatt
actttagatattttcaagccggatcctaatttcctagagaacgaaagaaagtatgaagaa
ttaaagaaggcaatacttggtgatgaatctgaagaaggagactctgatgccgaatcagag
gatgaagatgacaatgaagatgaagagtctgaagaagaagatgaggagcaaatgcaaata
aaggacgaaacagagacaaacttaatcaaccttcggagaacgatttaccttactattatg
tctagcgttgactttgaagaagcagggcataagctgttgaaaatcaaactagagcctggt
caggagatggaattgtgcataatgttattggagtgctgcagtcaggagaggacttatctt
cgttactatggactactgggacagcgattttgcatgattaacaaaatccatcaagaaaac
tttgagaaatgctttgtgcagcagtactccatgatccaccggctcgaaactaataaactt
cgtaatgtcgccaagttttttgctcatttgctcggcactgatgctcttccttggcatgct
ttggcttatatacggctgactgaggaggacacaacctcctcttctcgtatatttattaaa
atcctattccaggaaatgtcggagcaccttggtatccgcttgttgaatgagcgtctaaac
gacccaaccatgcaagattctctcgactctattttcccaaaggacaatcccaagaataca
aggtttgctatcaactttttcacttcaattggtcttggtggaattactgaaaatctacga
gagtatctaaagaacatgcctaggcttataatgcaacaacaaaagcccgtttctgaatca
gatgatgagtctggttcagagtcttcaggaactgaatcatcatcatccaattctgacgac
agtgatagtgaaagtgatgatagtcgaaggaagcagaggaggaggagaagataa

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

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