KEGG   Rhizorhabdus wittichii DC-6: HY78_10740
Entry
HY78_10740        CDS       T05200                                 
Name
(GenBank) long-chain fatty acid--CoA ligase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd00061  Fatty acid biosynthesis
sphd00071  Fatty acid degradation
sphd01100  Metabolic pathways
sphd01212  Fatty acid metabolism
sphd02024  Quorum sensing
sphd04146  Peroxisome
Module
sphd_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    HY78_10740
   00071 Fatty acid degradation
    HY78_10740
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    HY78_10740
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY78_10740
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:sphd01004]
    HY78_10740
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphd04147]
    HY78_10740
Enzymes [BR:sphd01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     HY78_10740
Lipid biosynthesis proteins [BR:sphd01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   HY78_10740
Exosome [BR:sphd04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   HY78_10740
  Exosomal proteins of breast cancer cells
   HY78_10740
SSDB
Motif
Pfam: AMP-binding AMP-binding_C_3 AMP-binding_C Prot_ATP_ID_OB_C
Other DBs
NCBI-ProteinID: ARR57146
Position
complement(2235338..2237113)
AA seq 591 aa
MRTFERFPNLVTMFFTRAREKGDAPFLWAKRDGAWTPLSWTEVARRVASLAAALRAQGLR
EGDRVVLVSENRPEFCIADLAIMTAGCVTVPTYTTNTERDHTHILENSGARAAIVSTAKL
AQVLLPAIVRSSTCEFLIGMEPLPATAVRTLDFAALVGDPAADVAAAEAAVADLRREDLA
CLIYTSGTGGAPRGVRQHHGAILCNVEGCVDIIAEDFGWDEEVFLSFLPLSHAYEHSGGQ
FLPIALGGQIYYAEGLEKLAANIEETRPTIMVVVPRLFELLRARLIKAVEKQGGIGQKLL
DKALELGAREKLRLADYPYKLAIDLLLKPKVQKRFGGRIKALVSGGAPLNPEVGQFFSSL
GLTLLQGYGQTEAGPVVSCNRPKAGIKLDTVGPPMKGVEVRIAEDGEILVRGELVMAGYW
RNEAETERVLKDGWLHSGDVGYLDERGRLRITDRKKDLIVNDKGDNIAPQKVEGMLTLQP
EIAQAMVAGDKRPYIVGLVVPDQEWLAGWAGERGLPPVLAELKGNADFHRALMAAVDRVN
ADLSVIEKVRRIAIADEPFSIENEQMTPSMKNRRHAIRAVYGDRMDALYGG
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgcggaccttcgagcgatttccgaacctcgtcaccatgttcttcacgcgcgcccgcgag
aagggcgacgcgcccttcctgtgggcgaagcgcgacggcgcctggacgccgctgagctgg
accgaggtcgcgcgccgggtcgcctcgctcgccgccgcgctgcgcgcgcagggcctgcgc
gagggcgaccgcgtcgtgctggtgtccgagaaccgccccgaattctgcatcgccgacctc
gcgatcatgaccgcgggctgcgtgacggtgccgacctacacgaccaacaccgaacgcgac
cacacccatatcctggagaatagcggcgcgcgcgcggcgatcgtctcgaccgcgaagctg
gcgcaggtgctgctgccggcgatcgtccgctcctcgacctgcgaattcctgatcggcatg
gagccgctgccggcgaccgcggtccgcaccctcgacttcgcggcgctcgtcggcgatccg
gccgccgacgtcgccgcggccgaggccgccgtcgccgacctgcggcgcgaggacctcgcc
tgcctgatctacaccagcggcaccggcggcgcgccgcgcggggtgcgccagcatcatggc
gcgatcctgtgcaacgtcgagggctgcgtcgacatcatcgccgaggatttcggctgggac
gaggaggtgttcctgtccttcctgccgctcagccacgcctatgagcattcgggcgggcag
ttcctgccgatcgcgctgggcgggcagatctattatgccgaggggctggagaagctcgcc
gccaatatcgaggagacgcggccgacgatcatggtcgtcgtcccgcgcctgttcgagctg
ctgcgcgcccgcctcatcaaggcggtcgagaagcagggcgggatcggccagaagctgctc
gacaaggcgctggagctgggcgcgcgcgagaagctgcggctggccgactatccgtacaag
ctggcgatcgacctgctgctcaagcccaaggtgcagaagcgcttcggcgggcggatcaag
gcgctcgtctcgggcggcgcgccgctcaatcccgaggtcgggcagttcttctcctcgctc
ggcctcaccctgctccagggctatggccagaccgaggcggggccggtcgtctcgtgcaac
cggccgaaggcggggatcaagctcgatacggtcggcccgccgatgaagggggtcgaggtc
aggatcgccgaggacggggagatactggtccgcggcgagctggtgatggccggctactgg
cgcaacgaggcggagaccgaacgggtgctgaaggacggctggctccattcgggtgacgtc
ggctatctcgacgagcggggccggctccggatcaccgaccgcaagaaggacctgatcgtc
aacgacaagggcgacaatatcgcgccgcagaaggtggagggcatgctgaccctccagccc
gagatcgcccaggcgatggtggcgggcgacaagcggccctatatcgtcggcctcgtcgtc
cccgaccaggaatggctggccggctgggccggcgagcgcggcctgccgccggtgttggcg
gagctgaagggcaatgccgatttccaccgcgcgctgatggcggcggtcgaccgggtcaac
gccgacctgtcggtgatcgagaaggtccgccgcatcgccatcgccgacgagcccttctcg
atcgagaacgagcagatgaccccgtcgatgaagaaccgccgccacgcgatccgcgcggtc
tatggcgaccggatggatgcgctttacggggggtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

Download RDF
DBGET integrated database retrieval system