KEGG   Sphingopyxis sp. QXT-31: BWQ93_11970
Entry
BWQ93_11970       CDS       T04913                                 
Name
(GenBank) chaperonin GroL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sphq  Sphingopyxis sp. QXT-31
Pathway
sphq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sphq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BWQ93_11970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphq03019]
    BWQ93_11970
   03110 Chaperones and folding catalysts [BR:sphq03110]
    BWQ93_11970
   03029 Mitochondrial biogenesis [BR:sphq03029]
    BWQ93_11970
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sphq04147]
    BWQ93_11970
Enzymes [BR:sphq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     BWQ93_11970
Messenger RNA biogenesis [BR:sphq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BWQ93_11970
Chaperones and folding catalysts [BR:sphq03110]
 Heat shock proteins
  HSP60 / Chaperonin
   BWQ93_11970
Mitochondrial biogenesis [BR:sphq03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    BWQ93_11970
Exosome [BR:sphq04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   BWQ93_11970
  Exosomal proteins of other body fluids (saliva and urine)
   BWQ93_11970
  Exosomal proteins of breast cancer cells
   BWQ93_11970
  Exosomal proteins of colorectal cancer cells
   BWQ93_11970
  Exosomal proteins of bladder cancer cells
   BWQ93_11970
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: APZ99128
UniProt: A0A1P8WYK2
Position
2496899..2498542
AA seq 547 aa
MAAKDVKFSRDARERILRGVDTLADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMLREVASKANDKAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGI
DLAVSKVVETIKAQSKPVSGTSEIAQVGIISANGDKEVGEKIAEAMDKVGKEGVITVEEA
KGLDFELDVVEGMQFDRGYLSPYFITNPEKMLVELSDPYILIFEKKLSNLQSMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTAGEM
ISEDLGIKLESVTLNMLGQAKRVTIDKDNTTIVDGAGDHDAIKGRVEQIRAQIETTTSDY
DKEKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGLSGINEDQTRGIDIIRRALQAPVRQIAENAGFDGGVVAGKLFDQNDSNFGFN
ASTDVYEDLVKAGVIDPTKVVRIALQDAASVAGLLITTEAGIAETPEDKPAMPMGGGGMG
GMGGMDF
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggctgctaaagacgtcaaattctcgcgcgacgcgcgcgaacgcattcttcgcggtgtc
gacaccctcgccgacgcggtgaaggtcaccctcggccccaagggccgcaacgtcgtgatc
gacaagagcttcggcgccccccgcatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaactcaaggacaagttcgagaatatgggcgcccagatgctgcgcgaagtcgcatcgaag
gcgaacgacaaggccggcgacggcaccaccaccgcgaccgttctcgcccaggcgatcgtg
cgcgaaggcatgaagtcggttgctgccggcatgaacccgatggacttgaagcgcggcatc
gacctcgcggtcagcaaggtcgtcgaaacgatcaaggcgcagtcgaagccggtttcgggc
acgtctgaaatcgctcaggtcggcatcatctcggccaacggcgacaaggaagtcggcgaa
aagatcgccgaagccatggacaaggtcggcaaggaaggcgtgatcacggtcgaggaagcc
aagggcctcgatttcgaactcgatgtcgtcgaaggcatgcagttcgaccgcggttacctg
agcccctatttcatcaccaaccccgaaaagatgctcgtagagctgtcggatccctatatc
ctgatcttcgagaagaagctgtcgaacctccagtcgatgctgccgatcctcgaagccgtg
gtgcagtcgggccgtccgctcctgatcatcgccgaggacatcgaaggcgaagcgctcgcg
acgctggtggtcaaccgtctgcgcggcggcctgaaggtcgcggccgtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctgcaggacatcgcgatcctcaccgccggtgaaatg
atcagcgaagacctgggcatcaagctcgagtcggtcacgctgaacatgctcggccaggcc
aagcgcgtcacgatcgacaaggacaacaccaccatcgtcgatggtgctggcgaccatgat
gcgatcaagggccgcgtcgaacagattcgtgcccagatcgaaacgaccacgtcggattac
gacaaggaaaagctgcaggaacgtctggcgaagctcgccggcggtgttgccgtgatcaag
gtcggcggcgcttcggaagtcgaagtgaaggaacgcaaggatcgcgtcgacgacgccctc
cacgcgacccgcgctgcggtcgaagaaggcatcgtccccggcggcggtaccgcgctgctg
tacgcgacgaaggcgctcgaaggcctgtcgggcatcaacgaagaccagacccgcggcatc
gacatcatccgtcgcgcgctgcaggctccggttcgccagatcgcggagaacgcaggcttc
gacggcggtgtcgtcgcgggcaagctgttcgaccagaacgacagcaacttcggcttcaac
gcctcgaccgacgtctatgaagacctggtcaaggccggtgtcatcgacccgaccaaggtc
gtgcgcatcgcgctgcaggacgccgcctcggttgccggtctgctgatcaccaccgaagcc
ggcatcgccgaaacgcccgaagacaagcccgccatgcccatgggcggcggcggcatgggc
ggcatgggcggcatggacttctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (4)   

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