KEGG   Sphingopyxis sp. QXT-31: BWQ93_13510
Entry
BWQ93_13510       CDS       T04913                                 
Name
(GenBank) RNase adaptor protein RapZ
  KO
K06958  RNase adapter protein RapZ
Organism
sphq  Sphingopyxis sp. QXT-31
Brite
KEGG Orthology (KO) [BR:sphq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sphq03019]
    BWQ93_13510
Messenger RNA biogenesis [BR:sphq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     BWQ93_13510
SSDB
Motif
Pfam: PapZ_C RapZ-like_N Rad17 AAA_22 AAA_33 AAA_18 AAA_30 AAA_16 AAA_29 ABC_tran Integrase_1 nSTAND_NTPase5 AAA_28 AAA_17 CoaE AAA_21 AAA_27
Other DBs
NCBI-ProteinID: APZ99388
Position
2809991..2810929
AA seq 312 aa
MSDDGQRLLLVTGLSGAGKSTVLKVLEDLGWEVVDNLPPALLDALLAAPAGKGREGRPLA
IGIDSRSRGFKPAPLVKRMKELREAGGRDIDTLFLDCAGAELERRFSETRRRHPMAEDRP
AADGIARERETMEPLRRWAQHVIDTTNYSSNDLQQEVRQRFGEAGTDEPVLSVLSFGFAR
GLPRNADLVFDMRYLRNPHWDPALKPGTGLDPAVAAYVMADPAYAATIAQIESLLLALLP
RYRAEGKSYVTIAFGCTGGRHRSVHVAERVAATLRAAGHAPTVTHRNLDSAPQDGLEGKP
PSASPASGGKQI
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcgacgacggccagcgcctgctgctcgtcaccggcctctcgggcgcgggcaagtcg
acggtgctgaaagtactcgaggatctgggctgggaggtcgtcgacaatctgccgcccgcg
ctgctcgacgccttgctcgcagcgcccgcgggaaaggggcgcgagggccgcccgctcgcg
atcggcatcgacagccggagccgcggcttcaagcccgcgccgctggtcaagcggatgaag
gaattgcgcgaggcgggcgggcgcgacatcgacacgctcttcctcgactgcgcgggcgcc
gagctcgaacgccgcttctccgagacgcggcggcgccatccgatggccgaggaccgtccc
gccgccgacggcatcgcgcgcgagcgcgagacgatggagccgctccgccgctgggcgcag
cacgtcatcgacaccaccaattactcgagcaacgatttgcagcaggaagtgcggcagcgc
ttcggcgaggcagggaccgacgagcccgtgctgagcgtgctgagcttcggcttcgcgcgc
gggttgccgcgcaacgccgacctggtgttcgacatgcggtacctgcgcaacccgcattgg
gacccggcgctcaaacccggcaccgggctcgaccctgcggtcgccgcctatgtgatggcc
gaccccgcctatgcggcgaccatcgcgcagatcgagtcgctgctgctcgcgctcctcccg
cgctaccgcgccgaggggaagagctatgtcaccatcgccttcgggtgcaccggcgggcgc
caccgctcggtccatgtcgccgaacgtgtggccgctacgctacgcgcagcgggtcatgcg
ccgacggtgacccaccgcaaccttgactccgccccgcaagatgggcttgagggcaagccc
ccgtccgcgtctcccgcatccggcggcaaacagatataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (20)   

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