KEGG   Schizosaccharomyces pombe (fission yeast): 2541099
Entry
2541099           CDS       T00076                                 
Symbol
pla1, SPOM_SPBC646.04
Name
(RefSeq) mRNA cleavage and polyadenylation specificity factor poly(A) polymerase Pla1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
spo  Schizosaccharomyces pombe (fission yeast)
Pathway
spo03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:spo00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    2541099 (pla1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spo03019]
    2541099 (pla1)
Enzymes [BR:spo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     2541099 (pla1)
Messenger RNA biogenesis [BR:spo03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     2541099 (pla1)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Polbeta
Other DBs
NCBI-GeneID: 2541099
NCBI-ProteinID: NP_595362
PomBase: SPBC646.04 SPBC646.04.1
UniProt: Q10295
Structure
Position
II:join(928989..930444,930488..930605,930645..930738,930780..930812)
AA seq 566 aa
MTTKQWGITPPISTAPATEQENALNTALINELKNQNLFESPAESEKRVKVLDELQQITTE
FVKKVSLAKHMNEKMANEAGGKIFTYGSYRLGVYGPGSDIDTLVVVPKHVSRDNFFQDLE
PMLREREEVTDLAAVPDAYVPIIKFKFLGISIDLIFARLSVPRVPRDLELSDNNLLKGVE
ERCVLSLNGTRVTDQILQLVPNRAVFKHALRAIKFWAQRRAIYANVVGFPGGVAWAMMVA
RICQLYPNAVSSVIVAKFFRILHQWNWPQPILLKPIEDGPLQVRIWNPKLYPSDKAHRMP
IITPAYPSMCATHNITLSTQTIILREMVRAGEIADQIMVKALPWSALFQKHDFFHRYKHY
LTITAAAKTAEAQLKWAGLVESKLRHLVTRLELVDAIALAHPFNKGFDKVYNCSSEEEAQ
QVASGVTLEVAYESTDHEKLANDTVNEEKADNTESKADGSENGEKQIFPVYTTTCYIGLE
LEKKKGHPIKRLDISWPTQEFYELCKKWDKYDDTLMNVFIKNTKNTALPDEVFEPGEERP
KATKKRSTADTAHSTEQLKRQKVSTA
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgactaccaagcaatggggtattacaccgccaattagtactgcacctgctactgaacag
gaaaatgctttgaatacggctttaattaatgagttgaagaaccaaaacttgtttgaatct
cctgccgaatctgaaaaaagagtaaaggttcttgatgagttgcaacaaataacgacagaa
tttgtaaagaaagtatcacttgccaaacatatgaacgaaaagatggctaatgaggcaggg
gggaaaatttttacgtacggaagttatagactgggcgtttatggacctggatcagacata
gataccctagtcgttgtacccaagcatgtttctcgcgacaatttctttcaggacttggaa
cctatgcttcgagaaagagaagaggtaactgaccttgctgctgtacctgacgcctatgtt
cctattattaagtttaaatttttgggaataagtatagatttaatttttgctcgtctttca
gttccgcgtgttccccgcgacctcgaattgtctgataataacttattaaagggtgttgaa
gaaagatgtgtgctaagtttgaatggtacacgtgttacggatcagattctgcagcttgtc
cctaatcgtgctgtttttaagcatgctttaagagccataaagttttgggctcaacgtcgt
gcaatatacgctaatgtcgtaggatttcctggaggagtcgcctgggccatgatggtagct
cgaatttgccaactatatccgaatgcagtatcttctgtgattgttgctaaattttttcgt
attcttcatcaatggaattggcctcaaccaatattgttaaagcccattgaagatggcccc
ttacaagtacgtatctggaatccaaaactttatccatccgacaaagctcaccgtatgcca
attataaccccggcttatccatcaatgtgtgcaactcataacattactttatccacccaa
acaattatccttcgcgaaatggttcgggctggagaaattgctgaccaaataatggtcaag
gctcttccctggtcagctttgtttcaaaaacacgacttttttcatcgttataagcattat
cttacgatcacagcagctgctaagacagctgaagctcaattgaagtgggcaggtttggtt
gaatctaagcttcgtcatttggttactagactggagcttgttgatgctattgctttggca
catcctttcaataaaggatttgataaagtgtataattgctccagtgaagaagaagctcaa
caagtagctagcggcgttactcttgaagtcgcatatgaatctacggatcatgaaaaatta
gccaacgatacagttaatgaagagaaagccgacaatactgagagtaaagctgatggttct
gaaaatggtgaaaaacaaatttttcctgtttacactacaacatgttatatagggcttgaa
cttgaaaagaagaaaggtcatccaattaaaagacttgatatttcttggcctacccaagaa
ttttacgagttgtgcaaaaaatgggataaatatgatgacaccttaatgaacgttttcatt
aagaatactaaaaatactgctttacctgatgaagttttcgaacctggagaagaacggccg
aaagctactaagaagaggtccactgctgacactgcacatagtacagagcaattaaaacga
caaaaagtttcaacggcataa

  All links  
Gene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   RIKEN BRC-DNA (3)   
   POMBASE (2)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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