KEGG   Sporosarcina sp. P33: SporoP33_01270
Entry
SporoP33_01270    CDS       T04790                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spor  Sporosarcina sp. P33
Pathway
spor03410  Base excision repair
spor03430  Mismatch repair
spor03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spor00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SporoP33_01270
   03430 Mismatch repair
    SporoP33_01270
   03440 Homologous recombination
    SporoP33_01270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spor03400]
    SporoP33_01270
DNA repair and recombination proteins [BR:spor03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SporoP33_01270
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SporoP33_01270
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SporoP33_01270
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHHA1 DHH
Other DBs
NCBI-ProteinID: ARD47004
Position
complement(262776..264824)
AA seq 682 aa
MTTALERLGAKVNFAIPNRFEHGYGPNSDYFEQLHTEGTEVLITVDNGISGIEQVAFAKT
LGMTVIVTDHHEMGDVLPAADAVIHPRHPEGNYPFGELAGVGVAFKLASALLGEPPLDLL
EFVAIGTIADLVPLEDENRYAVKEGIRRLRRSKRPGIRALMQVSGHELAALSEETIGFTI
GPRLNAPGRLGDADSAVDLLKSEDEQQALGIAEELNDLNKDRQQLVKEIAKEAEEQVENR
YGDQIPYVLVVEGEGWNPGVVGIVSSRLTEKYYRPSIILSLDHETGIAKGSARSIEGFDL
YKELSKNTSILPHFGGHAMAAGMSLKIEDVDLLRANLNEQAKEVLNEETLQPVLSIDVPL
ALDEIDIASIEALEQIRPFGVGFPKPVFLLEQLDRLSVRKIGAAKDHLKLEMGDRDERID
AIYFGAGALADEMAPQGKLSLTGDLQINEWNGRKKAQMLVEDIKCDEWQLFDYRGVREPA
RWLPMIPDKAQFIAFSEPSIQHFAPFFKDTPITLMGRDAIYPSSSIVLLDLPKQEEQLKQ
VMAATMADRVYLHLYVHDSMYFEKMPDRQQFGWYYSFLKKRQIFDLHQQIEMLSKHKGWK
KDMIKFMTKVFYELEFVTLENGKVTMLDSAGKRDLAEAPSYKKRQQQIKLEELLLYAPYQ
DLKNVFDSLREMPAVEEEKLWT
NT seq 2049 nt   +upstreamnt  +downstreamnt
ctgaccactgcgctcgaacgattgggtgcgaaagtgaacttcgctataccgaatcgtttt
gaacacggctacggaccgaacagtgactatttcgaacaactacatacagaaggcaccgaa
gtcctgatcaccgttgataacggaatctccggcattgagcaagtcgcgtttgcgaagacg
ctcggcatgaccgtcattgtcacagatcaccacgaaatgggtgacgtgctgccggcagca
gacgcagtcattcacccaagacatccggaaggcaattaccccttcggagaactggccggc
gtaggtgtggcgtttaaactcgcttccgccttgcttggtgagccgcctcttgatttgctt
gaatttgttgcgatcggcaccatcgccgatcttgtgccgcttgaagatgaaaatcgttat
gctgttaaagaaggcatccgcagattgcgccgttccaagcgacctggcatacgtgcatta
atgcaagtgagcggacatgagctggccgcattatcggaagaaacgattggctttacgatc
ggacctcgtctgaatgcgccgggaagacttggtgatgcagattctgctgttgatttattg
aaatcagaagatgaacagcaagcgctcggaattgcagaagaattgaatgatttgaataaa
gaccggcaacaattagtaaaagaaattgcaaaagaagcggaagaacaagttgagaaccgg
tatggtgatcaaattccatatgttctggttgtcgaaggggaagggtggaatcctggagtc
gtcggtatcgtgtcgtcgagactgacggagaaatactaccgcccgtccatcattttatca
ctcgatcatgaaaccggtatcgcaaaaggttctgcgcgcagtatcgaaggatttgatttg
tataaagaactgtcgaaaaacacgtccatcctgccgcatttcggcggtcatgccatggca
gcgggcatgtcgctgaagatagaagacgttgacttattgcgtgctaatttaaatgaacag
gcaaaagaagtcctgaatgaagaaacgttgcagcccgtgttatcgattgatgtgccgctt
gctttggatgaaatcgacattgcgtctattgaagctctggagcagatccggccatttggc
gtgggattcccgaaacccgtcttcttgcttgaacagcttgacagattatctgtccgtaaa
ataggtgcagcgaaagatcatctgaagctggaaatgggagacagagacgaacggatcgat
gccatttatttcggagcgggtgcattggcagacgaaatggctcctcagggaaagctgagt
ctgacaggtgatttacagatcaatgaatggaacggccgcaaaaaagcgcaaatgctggtg
gaagatatcaaatgtgatgaatggcagctgtttgactaccggggagtgcgtgagcctgca
agatggctgccgatgattccagacaaagcacaatttattgctttcagtgaaccatccatt
cagcattttgctccgtttttcaaagatacgcctattaccctgatggggcgtgatgcgatt
tatccatccagctcaattgttctgctggatttgccgaagcaggaagaacaattgaaacag
gtgatggcagcaactatggccgaccgggtgtatttgcatctctatgtgcatgattcgatg
tactttgaaaagatgccagaccgccagcaatttggctggtattacagctttttgaagaag
cgccagatatttgatttgcatcagcaaattgaaatgctttccaaacacaaaggctggaaa
aaagatatgataaaattcatgacaaaagtgttttatgaactggaatttgttacactagag
aatggtaaggtgacgatgcttgattctgccggcaaacgagatttggcagaagcgccatcc
tataaaaaacgccaacagcagatcaaactggaagagttgcttctttatgccccctatcag
gacttaaagaatgtgtttgactcgttacgtgagatgccagctgttgaggaggaaaaattg
tggacttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (6)   

Download RDF
DBGET integrated database retrieval system