Sporosarcina sp. P33: SporoP33_05965 Help Entry SporoP33_05965    CDS       T04790                                  Symbol ligA Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism spor  Sporosarcina sp. P33 Pathway spor03030   DNA replication spor03410   Base excision repair spor03420   Nucleotide excision repair spor03430   Mismatch repair Brite KEGG Orthology (KO) [BR:spor00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SporoP33_05965 (ligA)    03410 Base excision repair     SporoP33_05965 (ligA)    03420 Nucleotide excision repair     SporoP33_05965 (ligA)    03430 Mismatch repair     SporoP33_05965 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:spor03032]     SporoP33_05965 (ligA)    03400 DNA repair and recombination proteins [BR:spor03400]     SporoP33_05965 (ligA) Enzymes [BR:spor01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      SporoP33_05965 (ligA) DNA replication proteins [BR:spor03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      SporoP33_05965 (ligA) DNA repair and recombination proteins [BR:spor03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      SporoP33_05965 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      SporoP33_05965 (ligA)    MMR (mismatch excision repair)     DNA ligase      SporoP33_05965 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       SporoP33_05965 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT RNA_pol_A_CTD BRCT_2 DUF6120 Motif Other DBs NCBI-ProteinID:  ARD47814 Position complement(1186080..1188107) Genome browser AA seq 675 aa AA seqDB search MDDVLELEKRVAELHKILREYGHAYYDLDAPIVPDSEYDEKMQELLAIEEAHPDLIYPDS PTQRVGGAPLEVFSKVVHRHPMLSLANAFNEEDLRDFDRRVKEAAGSAVYVCELKIDGLA VSLQYEEGRLVQGATRGDGAVGEDITANLKTIRTVPLKLNEPLTIEVRGEAYMPKQSFVT LNEDRDEAGEVPFANPRNAAAGSLRQLDSQVAASRNLAVFIYAVGGDAEVYGLDSHSEAL NKVDELGLTTNKERKRCATIEEVLEYVEYWTKNRQSLDYEIDGIVIKVDNFESQEQLGYT AKSPKWAIAYKFPAEEVQTKLLDIELSVGRTGVVTPTAILEPVRVAGTTVGRASLHNEDL IREKDIRIGDHVVLRKAGDIIPEVVMPLIEQRTGEEEPFHMPEACPECDSELVRIEGEVA LRCVNPKCPAQMKEALIHFVSRRAMNIDGVGEKLVEQLYEADLVQDVSDLYTLTKEELLG LERIGEKSATNILAAIDTSKENSLEKLLFGLGIRHVGEKVARILAEEYRTLEALEQATDE DLVNIFEIGAIVADAVTTYFSTEEVQDVMNKLRSYGVNTVYKGAAREELPTTGPFAGKTI VLTGKLTALTRGEAKEQIESLGGTVSGSVSKKTDLVIAGEDAGSKLTKAKELEIEIWDEQ AMLEALGVDTNEKND NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggatgatgttctggaactggagaagcgagtggcagaactccataaaattctgcgtgaa tacggacatgcctactatgatttggatgccccgatcgttcccgattcagaatatgatgaa aaaatgcaggagcttctggctatagaagaagcacatcctgatctaatatatcctgactct ccgacacagcgcgtgggcggggcgccgcttgaggtatttagtaaagtcgttcatcgtcac cctatgcttagcctggcgaatgcatttaacgaagaagatttgcgggactttgacagacgg gtgaaagaagcagctggcagcgcggtatatgtatgtgaattaaaaatcgacggacttgcc gtttctttgcagtacgaagaaggccggctagtgcagggggccacacgtggggacggtgca gttggtgaagatattactgcgaacttgaaaaccattcgaacggtgccgctgaaactgaac gaaccgctgacaattgaagtgcgcggagaagcttatatgccgaaacagtcatttgttacg ctcaacgaagaccgggatgaagcaggtgaagtgccgttcgcgaaccctcggaacgcggcc gcgggttcactccggcagctcgattcccaagttgctgcgagccgcaatcttgccgtgttc atttatgctgttggcggagatgcggaagtatatgggctggacagtcattctgaagcactc aacaaagtggatgaactgggtctgacgacaaataaagagcgcaagcgctgtgcaaccatt gaagaagtgctggagtacgtggaatactggacaaaaaacagacagtccctcgattatgaa atcgatgggatcgtcattaaagtagataatttcgagtcacaggaacagctcggctataca gcgaaaagccctaagtgggcgattgcctataagttcccggcagaggaagtgcagactaaa ctgcttgatatcgagttaagtgtagggcgaacaggagtcgtcacaccgactgcgattctt gagccggtgcgcgttgcgggtacgacagttggacgggcatctttgcataatgaggattta atacgggaaaaggatatacgaatcggcgatcatgtcgtactgcgaaaagcgggtgacatt attcctgaagttgtgatgccgctgatagagcagcggacgggtgaagaagaacctttccat atgccggaagcttgtcctgaatgcgattcggagctcgtacggatcgagggagaagtggca ttgcgttgtgtgaatcccaaatgtcctgctcaaatgaaggaagcgctgattcactttgtt tccagaagagcgatgaatattgacggagtcggcgaaaaacttgtcgaacaattgtatgaa gctgatcttgtacaagatgtatctgatctgtatacattgactaaagaagaactgctgggg ctggaacgaattggcgagaaatccgcaaccaatattttagccgctattgatacatccaaa gagaattcactggaaaaactcctgttcggactgggaatccgtcatgtgggcgaaaaagtt gcaagaatccttgcagaagaatatcggacacttgaagcactggaacaagcaaccgatgaa gatcttgtaaacatttttgaaatcggtgcaatcgtagcagatgcggtcacgacctatttc agcacggaagaagtgcaggacgtcatgaacaaactccgctcatacggggtgaatactgtc tataaaggtgctgcccgggaggagttaccgactactgggccgtttgcaggcaagacaatt gtactgacagggaagctcactgcgttaactcgcggagaagcgaaagaacagatagaatcg cttggcggaacagtcagcggcagtgtcagcaagaaaacagatctggttattgccggtgag gatgcaggctcgaagctgacgaaagccaaagaattagagattgaaatttgggatgaacaa gccatgcttgaagcccttggagtggatacgaatgagaagaacgactaa

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