KEGG T11531: 135088703

Scylla paramamosain (green mud crab): 135088703

Entry

135088703         CDS       T11531

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

sprm Scylla paramamosain (green mud crab)

Brite

KEGG Orthology (KO) [BR:sprm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sprm03041]
    135088703
Spliceosome [BR:sprm03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    135088703
Complex C
   U4/U6.U5 tri-SnRNP related factors
    135088703

SSDB

Motif

Pfam:

MA3 DUF4042

Other DBs

NCBI-GeneID:

135088703

NCBI-ProteinID:

XP_063839734

Position

31:complement(15215465..15222935)

AA seq 1404 aa
MGSRSRTRSPASDRERSHGRHRDRERSSRHHHKSRHHKSSKGRSRDRSREKSVSRDRHRR
ERSRSRNRSDQHHSREDRHSRKREKDGGSRQRDHSSSEDDYRSKRRSHRERETDKRSRKT
SDNTSARDHSSSEDEYKSKRKSHRERDTDKRSRKTSERASDDETLEKNNGSTVKQKASEA
TDVTRKDDHHVKANKDTKDLKDKSQSSKHNKKSEEKNVRENRTPDKEKAPKDTAEKEHKK
KDTTENEPKKKETVEKSEKPAESKSSRSEESKEMRSEKKKREESLEKQTNRSEPKEQQEK
TSEKKLEEKIVPESKKKDEEEEKSDSEKQEKHEKKKSSKRKSEAEEQKKKHKKQKHKKHS
SSSESEDESGEDNSNKKPQYDSDETTEQELLRKKRQLEEQLQIEEEIQQRTKAIEKEREA
IRAKKLKSTINSEVTKPTEKEKSPHSRSRSRSPGRSEERKQTRDERSSRSDKRSRNYSSD
EAEEPQIGARYWGGDTSKETSQSQKSKAFKTSDTYWNKYADKLGIQIEDPRNSDADYEKK
KDKDRREDKRRDSSSDRPSRSEESSRKDSKRKGEGSEKNNVESSGKGSDVPAAPLIKKPV
MDPLTTRTGGAYIPPAKLKMMQAQITDKSSEVFQRLAWEALKKSINGLVNKVNVSNIGII
VRELLKENIVRGRGVLCRALMQAQAFSQTFTHVYAALVAIINTKFPQIGELLLKRLVIQL
RRGVKKNDKNVCMSCCRFIAHLVNQQVAHEVVALEILTFLLERAKDFTSESEVAEKSRND
SCELAILFITECGEKLNEVSPRGMTIILETFRHILHEGKLETRVSYMLDVLFAVVKDGFG
DHPAVAEELDLVEENEQFTHIVELDGKLDSQDILNVFKADPDYVANEEKYKEIRIGILGE
ESDESEAESGSESDDEASDDDEEDEEKKESETILDETETNMVAFRRTVYLTIQSSLDIDE
CAHKLLKGEIKPGWESELCNMILDCCAQQRTYVKFYGLLAQRFCMINKVYQEPFQQIFKD
AYDTCHRLETEKLRNVTRLFAHLLFSDAISWEVLSHIHLNEDETASSSRVFIKILFQELV
EFMGLAKLNERLRDPTLAHAFEGLLPRDNPRNTRFAINFFTSCGLGGLTDDLREFLRTQP
KPTAVVAPVQQISKTEEAGGEDDDSTSSSSSSSSSSSSSSSSSSSSDSSSSDSSSSSSDS
SSSDSSTSSSSSDSSSDSSSDSGDSSSDSEDSSSDHHASKDNELKKKKKHRMKDTKRKSS
SDKTKIRSSKKNERRSRDRKARRSKRSDSEEESNTRGERSGRREERRESYERRSHHSKEE
RGSEAAKKGRERERRGGSHEHSEREERRHGRSHRRKENDRESDNRIKADVRKEHKRRHSS
DEEQEYERKRDSSVDRSDKRRKMK

NT seq 4215 nt +upstreamnt +downstreamnt
atgggcagcaggagtcgcacgcgttccccggctagtgaccgagagaggagtcacgggagg
caccgggatagagagaggagcagcagacaccaccataagtccaggcaccacaagtcctca
aagggcagaagcagagacaggagcagggagaagagtgtgagcagagatcgccacaggaga
gagaggagcaggagtcgaaacaggagcgaccaacatcactccagagaagacaggcactct
cggaagagggagaaggatggaggcagcagacagagggaccattctagctctgaggatgat
tatagaagcaagaggaggtcccacagggaaagggaaactgacaaacgttcaagaaagact
tcagacaatacaagtgcaagagatcactccagctctgaggatgagtataaaagtaagagg
aaatctcatcgagaaagagacactgataaacgctcaaggaagacttcagaacgtgcaagt
gatgatgagactcttgagaaaaataatggcagtacagtgaaacaaaaagcatcagaagcc
acagatgtgacccgtaaggatgatcaccatgtaaaagctaataaagacacaaaggattta
aaggacaagagtcagtcttcaaaacataacaagaaatcagaagagaagaatgtgagagag
aaccgaaccccagacaaagagaaagcaccaaaggatacagcagaaaaggaacataagaaa
aaagatactacagaaaatgaaccaaagaaaaaagagacagtagagaaaagtgaaaagcca
gctgaatccaaaagttccaggtcagaagaatccaaggagatgagaagtgagaaaaagaag
agagaggaaagtcttgagaaacagactaacagatcggagcccaaagagcaacaagaaaag
acctctgagaaaaagttagaggaaaaaattgttccagaaagtaagaaaaaagatgaggaa
gaggagaagagtgacagtgagaaacaagaaaagcatgagaagaagaaaagctctaaaaga
aaaagtgaagctgaggaacagaagaagaaacacaagaaacaaaagcataagaaacactca
tcgagtagcgagagtgaagacgaaagcggcgaagacaacagcaacaagaaaccacaatat
gacagcgatgaaaccacagaacaggagttgctgagaaaaaagagacaactagaagaacag
ctgcaaattgaagaggaaatacagcagcgaaccaaagcaatagagaaggaacgggaagca
attcgagccaagaaactgaaatccacaatcaactcggaagtaacgaaacccactgagaag
gagaagtcacctcactccaggtctcggtcacgctccccaggaagatcagaggaacgtaaa
caaaccagggatgagagaagcagcagaagcgataagaggtcaaggaattactcatcagat
gaagcggaggaaccacagataggtgcacgatactggggtggtgatacttccaaggaaaca
tcccagtcacagaaatcaaaagcattcaagacgagcgacacttactggaacaagtatgcc
gacaagctgggcattcagattgaagacccaaggaactctgatgcagattatgaaaagaag
aaggacaaggacaggagggaagataaaaggagagactcatcatcagataggccaagtaga
tctgaggaaagctcaagaaaggatagtaagagaaaaggtgaaggaagtgagaagaataat
gtggagtcttccggtaaaggttctgatgtccctgcagcaccactcataaagaaaccagtg
atggatcctctcaccacaagaactggcggagcatacatcccaccggctaaactgaaaatg
atgcaggcacagatcacagacaagtccagcgaggtgttccaacggttggcatgggaggcg
ctcaagaagtccatcaatggcctcgtcaataaagtcaacgtctcaaacatcgggatcatt
gttagagagttgctgaaggagaacatagtgcgggggcgaggcgtgctgtgccgggccctg
atgcaagcgcaggcattctcacaaaccttcacccatgtctatgcagcactggtggccatc
atcaacacaaagttccctcagataggcgagctactcctgaagcgtttggtcatccagctg
aggcgaggtgtcaagaagaatgacaagaacgtgtgcatgtcctgctgtcggttcattgct
catttggtcaaccagcaagtggctcatgaggttgtggctctggagatcctcaccttcctc
ctggagcgagccaaggacttcacctcagaatcagaagtggccgagaaatccaggaacgat
tcgtgtgaacttgccatcctgttcatcaccgagtgtggcgagaagctgaatgaggtgagt
ccgagagggatgacaatcattctggagactttcaggcacattcttcatgagggaaagctg
gagacccgagtgtcgtacatgctggatgtcttatttgctgttgtgaaggacgggtttgga
gaccatcctgctgtggccgaggaacttgacctggtggaggagaacgaacagttcactcac
attgtggagcttgatgggaaactggactcccaggacatcctcaacgtgttcaaggctgac
ccagattacgtggcaaatgaggaaaagtacaaggagatccgcataggtatcctgggagag
gagagcgacgagagtgaggcggagagcggctctgagagtgatgacgaggcctccgatgat
gatgaggaggacgaggagaagaaggaatctgagaccatcctggacgagacggagaccaac
atggtggccttccgccgcaccgtatacctcaccattcagtcgtcactggatattgacgag
tgcgctcacaagttgctgaagggagagatcaagccaggctgggaatctgaactgtgcaac
atgattctggattgctgcgcccaacaacgcacgtacgtcaagttttacggcctcctggca
caacggttctgcatgattaacaaggtgtaccaggagccattccaacagatcttcaaggat
gcatatgatacctgccaccgcctggaaactgaaaagctgaggaatgtcacccgcctcttt
gcccacttgctgttttctgatgccatatcctgggaggtgctgtcccacatccacctgaat
gaagatgagacagccagctcttcaagggtcttcatcaagattctgttccaggaattggta
gagtttatgggcctggccaaactcaatgagaggctgcgggaccccacattggcccatgcc
tttgagggcctcctgcctcgggacaacccacgcaacactcgctttgccatcaacttcttc
acctcctgtggtctgggtggcctcactgatgacctccgcgagtttcttcgcacacagcca
aaacctactgctgttgtagcaccagttcagcagatcagtaaaacagaggaggctgggggt
gaagatgacgacagcactagcagcagcagtagtagcagtagcagtagtagcagtagcagt
agcagcagtagtagcagtgacagtagcagtagtgacagcagcagtagcagcagtgacagc
agtagcagtgacagcagcaccagcagcagcagctcagacagttcatcagacagtagcagt
gacagtggtgactcgtcaagtgactcagaagacagctcaagtgaccatcatgcaagcaaa
gataatgaactgaagaaaaagaaaaaacacagaatgaaagataccaagaggaaaagttcc
agcgataaaacaaagatcagatcaagcaagaagaatgagagaagatcaagagatagaaag
gcaagaaggagcaaaagaagtgacagtgaagaagagagcaacaccagaggagagagaagt
ggaaggagagaagagaggagggagtcatatgaaaggagaagccatcactctaaagaggag
agaggttctgaggctgcaaagaaagggagggaaagggaaaggagaggaggcagccatgag
cacagtgagagggaggagagaaggcatggaaggtctcacagaaggaaggaaaatgacaga
gaatcggataatcgtatcaaggcggatgtgaggaaggagcacaagaggagacacagcagc
gatgaggagcaggagtatgagcgcaagagggacagcagtgtggacaggagtgacaagagg
agaaagatgaagtga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

Download RDF

DBGET integrated database retrieval system