KEGG   Sphingobium sp. RSMS: EGM87_06545
Entry
EGM87_06545       CDS       T10811                                 
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs00550  Peptidoglycan biosynthesis
sprs01100  Metabolic pathways
sprs01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    EGM87_06545 (mrdA)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    EGM87_06545 (mrdA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sprs01011]
    EGM87_06545 (mrdA)
Enzymes [BR:sprs01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     EGM87_06545 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:sprs01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   EGM87_06545 (mrdA)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer EABR
Other DBs
NCBI-ProteinID: UXC92127
Position
1:1420768..1422837
AA seq 689 aa
MKLPLLKKKTVTEASLSFTFTRRAMVVGGLQGAIGALLVGRMGWISVAENEKYNLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPERATDAENTIRSLAHLLALSDDEVD
RIKEELDKSAGFRPVQVAEKLTYDQFAAVSVRLPDLPGVAPSQGFSRNYPAGATVGHLLG
YVGAASAKDYEERKDPLLITPGFKVGKDGLERSFDKELTGKPGAKRVEVTARGKIVRELT
TRPDTPGNAIKLTIDAGLQEYAGRRLATQSGSVVVIDCHNGDVLAMASMPSFDPNSFSDG
ISHLEWDMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVSPMETVNCAGAIRVG
NTLFHCHKRRGHGGLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFALPFPS
QSFGTVPDPAWKLKKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
FGAQRPTPASVGVNEEHLVTIRDAMSAVVNGGGTGGAARIPLPGVMMAGKTGTAQVRRIT
MAERGGGVRSNASLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHVNRIEDAPMIAADT
MTFLFDQAKAIEKLETIEKDWGGPPAERLARQMAAYRLAKAIEKGEAPLPEAANAMNASA
GNGATATAAPPPAPAAEADDAPPPADSAP
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgaagctgcccctgctcaagaagaagaccgtcaccgaagcctccctgtccttcaccttc
acgcgccgggcgatggtggtggggggcctgcaaggggcgatcggggcgctgctggtcggg
cgcatgggctggatcagcgtcgccgagaatgagaaatataatctgctgtcggaaagcaat
cgcgtcaacctgacgctgattccgccgcggcgcgggtggatcatcgaccgcaacggacgg
ccgctggcgaacaatcgcacggacttccgcgtcgacctgatcccggagcgggcgacggac
gcggagaacaccatccgcagcctcgcccatctgctggcgctcagcgatgacgaagtggat
cggatcaaggaggaactggacaagtcggcaggtttccgcccggtgcaggtggcggaaaag
ttgacctacgatcagttcgcggcggtcagcgtccggctgcccgacctgccgggcgtggcc
ccgagccagggcttttcccgcaattatccggcaggtgcgaccgtcgggcacctgctcggc
tatgtcggcgcagcttcggccaaggactatgaggagcgcaaggacccgctgctgatcacg
cccggcttcaaggtcggcaaggatgggctggagcggtctttcgacaaggaactgacgggc
aagcccggcgcgaaacgggtggaggtgacggcgcggggcaagatcgtgcgggaactcacc
acccggcccgacacgccgggcaacgcgatcaagctgaccatcgacgcgggcctccaggaa
tatgccgggcggcggctggcgacgcagagcgggtcggtggtggtgatcgactgccataat
ggcgacgtgttggccatggcgtccatgcctagtttcgatccgaacagcttttccgatggc
atcagccatctggaatgggacatgctgtcgaaggacgaccatgtcccgttgcgcaacaag
acgttgcaggggctgtacccgccgggatcgacggtgaagccgatggtggcgctcgcgctg
ctggaggcgggagtttcacccatggagacggtgaactgcgcgggtgcgatccgggtcggc
aacacgctgttccactgccataaacggcggggccatggcgggctcaacatgcggggcgcc
atcgcccaaagctgcgacatctacttctaccagatggcgcagcggatcggcatggaccgg
atcgccagcatggcgcggcgcgtgggcatggggcagaaattcgcccttcccttccccagc
cagagtttcggcaccgttcccgatccggcgtggaagctcaagaaatacaaccagaaatgg
caggtctacgacacggtcaacgcgaccatcggccagggctatatgctcatcaacccgttg
cagatggctgtaatggcggcgcggctggcgacgggccggcagttgatgcccaacttcatc
ttcggcgcgcagcggcccacgcctgcgtccgtgggggtgaatgaggagcatctggtgacc
atccgcgacgcgatgagcgcggtggtgaacggcggcggcacgggcggcgcggcccgcatc
ccgctgcccggcgtgatgatggccggcaagaccggcacggcgcaggtccgccgtatcacc
atggccgaacgcgggggcggcgtgcgcagcaacgcatcgctgccgttcaagctgcgcgac
catgcgctgttccagggcttcgcgccgttcgacaatccccgctatgccattgcctgcatc
atcgagcatggcggccacgtcaaccgcatcgaggacgcgcccatgatcgcggcggacacc
atgactttcctgttcgaccaggcgaaggcgatcgagaagctggagaccatcgaaaaggac
tggggcggtccgccggccgaacggctggcgcggcagatggcggcctacaggctggcgaag
gcgatcgagaagggcgaggcgcctcttcccgaagcggccaatgcgatgaacgcatccgcc
ggcaatggcgcgaccgcgaccgccgccccgcctccggcaccggctgccgaagcggacgac
gccccgcccccggcggacagcgcgccatga

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