KEGG   Shewanella psychromarinicola: EGC80_10745
Entry
EGC80_10745       CDS       T09848                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
spsr  Shewanella psychromarinicola
Pathway
spsr00521  Streptomycin biosynthesis
spsr00523  Polyketide sugar unit biosynthesis
spsr00525  Acarbose and validamycin biosynthesis
spsr00541  Biosynthesis of various nucleotide sugars
spsr01100  Metabolic pathways
spsr01110  Biosynthesis of secondary metabolites
spsr01250  Biosynthesis of nucleotide sugars
Module
spsr_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:spsr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    EGC80_10745 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    EGC80_10745 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    EGC80_10745 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    EGC80_10745 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    EGC80_10745 (rfbB)
Enzymes [BR:spsr01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     EGC80_10745 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 adh_short KR Sacchrp_dh_NADP
Other DBs
NCBI-ProteinID: AZG35351
UniProt: A0A3N4EUP4
Position
2452078..2453157
AA seq 359 aa
MKILVTGGAGFIGSAVVRHIINITKDSVINVDKLTYAGNLESLKSIESNDRYVFEQVDIC
DRAELDRVFSTHKPDAVMHLAAESHVDRSITGPSDFIQTNIVGTYTLLEATREYWNTLAD
DAKKAFRFHHISTDEVYGDLPHPDEQDGQSCNEALPLFTEETSYAPSSPYSASKASSDHL
VRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKSLPIYGKGDQIRDWLYVE
DHARALYKVVTSGKVGETYNIGGHNEKQNIEVVKTICSILDTLVPKDALYAEQITYVTDR
PGHDRRYAIDASKMSNELNWQPEETFETGLRKTIEWYLTNQTWCQHVQDGSYQRERLGI
NT seq 1080 nt   +upstreamnt  +downstreamnt
atgaaaattctagttacaggcggagcaggctttattggctctgcagtagtgcgtcatatc
atcaatattaccaaagacagcgtcattaatgttgataaattgacctatgccggtaacctt
gaatctttgaaaagtatcgagtcaaatgaccgttatgttttcgaacaagtcgatatttgt
gatcgtgctgaattagatcgggtttttagtactcataaacctgatgccgttatgcatctt
gcagccgaatctcatgttgaccgttcaattaccgggccatcagactttattcaaacaaat
attgttggtacctacacactccttgaagcgacaagagagtattggaatactttagctgat
gatgctaaaaaagcatttcgtttccatcatatctcaacagacgaagtatatggcgattta
cctcacccagatgaacaagatggtcaaagttgtaatgaagcgctgccattatttaccgaa
gaaacttcttatgcgccaagcagtccttattcagcatctaaagcttcaagcgaccactta
gttagagcttggttacgtacgtacggtttacccaccattgtaacgaactgctctaacaac
tacggtccgtatcactttcctgagaagttaattcctttagtaattctaaatgcgttagaa
ggcaagtcacttccaatctacggcaaaggtgatcaaatacgtgattggctctatgtagaa
gaccatgctcgtgcactttataaagtagtgacctccggtaaagtcggtgagacttacaat
attggtggtcacaacgagaaacaaaatattgaagtggtcaaaactatttgcagtattcta
gacaccctagtgcctaaagatgcgttatacgctgagcaaatcacatatgtcacagaccgc
cccggtcacgaccgtcgttatgcgattgatgccagtaaaatgagcaatgagcttaactgg
caaccagaagaaacatttgaaacgggtttacgtaaaaccattgaatggtatctgactaac
cagacatggtgtcaacatgtgcaagatggtagctaccaacgcgaacgtttaggtatttag

DBGET integrated database retrieval system