KEGG   Salinibacter ruber M8: SRM_01744
Entry
SRM_01744         CDS       T01209                                 
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
  KO
K03652  DNA-3-methyladenine glycosylase [EC:3.2.2.21]
Organism
srm  Salinibacter ruber M8
Pathway
srm03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:srm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SRM_01744 (alkA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:srm03400]
    SRM_01744 (alkA)
Enzymes [BR:srm01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.21  DNA-3-methyladenine glycosylase II
     SRM_01744 (alkA)
DNA repair and recombination proteins [BR:srm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SRM_01744 (alkA)
 Prokaryotic type
     SRM_01744 (alkA)
SSDB
Motif
Pfam: Pur_DNA_glyco
Other DBs
NCBI-ProteinID: CBH24665
Position
complement(1989703..1990434)
AA seq 243 aa
MTVAVEEGGGITPIGQQVRRYLCRSDLPTTLPTVHPNMEPLPASFFNRPTVSVARDLLGA
RLVHEAPTGTRLVGRIVETEAYTEDDPACHASHLSRDPETGEVVGQGRGQDLFAAPGTAY
VYLIYGVHWLLNVVTEPEGTAGAVLIRAVEPEEGLQDMRTERGVDRRVDLTNGPGKLAEA
FGIDGEFHQTRLTARPLFFADGDSVDDEQVARSSRIGISKGVERSWRWYVAANRFVSPAS
PSG
NT seq 732 nt   +upstreamnt  +downstreamnt
atgacggtcgccgtcgaggagggagggggcataacaccaatcgggcaacaagtgcgcaga
tacctgtgccgctcggatctaccgaccaccctgccaactgttcaccctaacatggagcct
cttcccgcatccttcttcaaccggcctacggtctccgttgcccgagacctgctgggcgcc
cgtctcgtccacgaggccccgacgggcacccgcctcgtcgggcggatcgtggagacggag
gcctatacggaggacgacccggcctgccacgcctcgcacctctcgcgtgatccggagacc
ggtgaggtggtcggtcaggggcggggccaagacctgttcgccgcgccgggcaccgcgtac
gtgtacctcatctacggcgtccactggctcctcaacgtggtgacggaaccggaggggacg
gcgggcgcggtgctgattcgggcggtggagcccgaagagggcctccaggacatgcggacg
gagcggggcgtcgaccgcagggtggatttgacgaacgggcccgggaagctggccgaggcg
ttcggcatcgacggcgagtttcaccagacgcgcctgacggcccgtccgctgttttttgcc
gacggggactccgtggacgacgaacaggtggcccggtcctcacgcatcggcatctccaag
ggggtggagcgctcctggcggtggtacgtggcggcgaaccggtttgtctcgccggccagc
ccgagtggataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (3)   

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