KEGG   Skermanella rosea: JL101_003025
Entry
JL101_003025      CDS       T07666                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sroe  Skermanella rosea
Pathway
sroe00521  Streptomycin biosynthesis
sroe00523  Polyketide sugar unit biosynthesis
sroe00525  Acarbose and validamycin biosynthesis
sroe00541  Biosynthesis of various nucleotide sugars
sroe01055  Biosynthesis of vancomycin group antibiotics
sroe01100  Metabolic pathways
sroe01110  Biosynthesis of secondary metabolites
sroe01250  Biosynthesis of nucleotide sugars
Module
sroe_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:sroe00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JL101_003025 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JL101_003025 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JL101_003025 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JL101_003025 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JL101_003025 (rfbB)
Enzymes [BR:sroe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JL101_003025 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short Sacchrp_dh_NADP KR Ldh_1_N
Other DBs
NCBI-ProteinID: UEM04431
Position
647019..648104
AA seq 361 aa
MKIIITGAAGFIGSAVARHLLRDTNASIVCLDKMTYAAHPDTLAPIIDGVRAVFEPVDIC
DRAEVERVFREHRPDAVMHLAAESHVDRSIEIPGVFIETNVVGTYVLLEAARRHWSDLTG
ERRESFRFHHVSTDEVYGSLGPTGKFTEETPYAPSSPYSASKASADHIVQAWHHTHGLPV
VMSNCSNNYGPYQFPEKLIPLMILNALEGKPLPVYGAGANVRDWLYVEDHAAALVRILTA
GRVGQKYNVGGDAERSNLEVVHAICDTLDAMLPRERPRRDLITHVADRPGHDLRYAIDAT
KIRRELGWEPSVTFEAGLRRTIEWYLDNQSWWQPLRSAVYGGQRLGLGALETTRTLEVVA
S
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagatcatcatcaccggtgccgcaggcttcatcggttcggccgtcgcgcggcatctt
ctgcgggacacgaacgcgtcgatcgtgtgcctggacaagatgacctacgcggcccatccc
gataccctggcgccgatcatcgacggcgtgcgcgcggtgttcgagccggtggacatctgc
gaccgggccgaggtcgagcgcgtcttccgggaacaccggcccgacgcggtcatgcacctg
gccgccgaaagccacgtcgaccggtcgatcgagatccccggcgtcttcatcgagaccaac
gtggtcggcacctatgtgctgctcgaggcggcgcgccgccactggtcggacctgaccggg
gagcggcgcgagagcttccggttccaccatgtctccaccgacgaggtctacggctcgctg
gggccgaccggcaagttcaccgaggagacgccctacgcgcccagctcgccctattcggcg
agcaaggcctcggccgaccatatcgtccaggcctggcaccatacccacggccttccggtc
gtcatgagcaactgctcgaacaactacggcccctaccagtttcccgagaagctgatcccg
ctgatgatcctcaacgcgctggagggcaagccgctgccggtctacggcgccggggccaat
gtccgcgattggctgtacgtcgaggaccacgcggcggcgctggtgcggatcctcaccgcg
ggacgggtggggcagaaatacaatgtcggcggcgatgccgagcgcagcaaccttgaggtc
gtgcacgccatctgcgacacgctcgacgcgatgctgccgcgcgagcggccccgccgcgac
ctgatcacccatgtggccgaccggccgggccatgatctccgctacgcgatcgacgcgacg
aagatccgccgcgaactgggatgggaaccgtcggtgaccttcgaggccggcctgcgccgg
accatcgaatggtacctggacaaccagtcctggtggcagccgctccgctccgccgtctat
ggcgggcagcgcctcggtctcggcgccctcgaaaccacccgcacgctggaggttgtcgcc
tcgtga

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