KEGG   Staphylococcus saccharolyticus: I6I31_01050
Entry
I6I31_01050       CDS       T07353                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
ssac  Staphylococcus saccharolyticus
Pathway
ssac03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ssac00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    I6I31_01050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssac03021]
    I6I31_01050
   03400 DNA repair and recombination proteins [BR:ssac03400]
    I6I31_01050
Enzymes [BR:ssac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     I6I31_01050
Transcription machinery [BR:ssac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     I6I31_01050
DNA repair and recombination proteins [BR:ssac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      I6I31_01050
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L DUF961 HHH_5 SAM_EPH
Other DBs
NCBI-ProteinID: QQB98678
Position
complement(197338..198282)
AA seq 314 aa
MIEIEKPRIETIEVSEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAVDNVVEDVSTIIMNIKKIALKIYSEEDKTLEIDVKDEGEVTASDITHDSDVEI
LNPELKIATVSKGGHLKVRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKIMTEHLNIFVGLTDEAQNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq 945 nt   +upstreamnt  +downstreamnt
atgatagaaattgaaaaacctagaattgagacaattgaagttagtgaagatgctaaattc
ggtaaattcgttgttgaaccacttgaacgtggctatggtactacactaggaaactcctta
cgtcgtatcctactatcttcattaccaggtgcagccgttaaatacattgaaattgaagga
gttttacacgaattctcagcagtagataatgttgttgaagatgtttcaactattattatg
aacattaagaaaatcgcattaaaaatttactctgaagaagataaaactctagaaatcgat
gttaaagatgaaggcgaagttactgcaagtgacattactcacgacagtgatgttgagatt
ttaaatccagaacttaaaatcgcaactgtgtctaaaggtggacatcttaaagtgcgtctt
gttgctaataagggtagaggttacgcattagctgaacaaaataatactagtgatttacca
attggtgtaattcctgttgattcactatattcacctgtagaacgtgttaactatacagtt
gaaaatacacgtgtaggtcaaagtagtgattttgataaattaactttagatgtttggaca
aacggttcaatcacaccacaagagtcagtctcattagcagctaaaataatgactgaacac
ttgaatatctttgtaggtctaactgatgaagctcaaaatgctgaaatcatgattgaaaaa
gaagaagatcaaaaagagaaagtacttgaaatgtctattgaagaattagacttatctgta
cgttcttataactgcttaaaacgcgcaggaatcaattctgtacaagagttagctgataaa
tctgaagctgacatgatgaaagtgcgtaatttaggtcgtaaatctttagaagaagtaaaa
tataaattagaagatttaggattaggattaagaaaagaagattga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (7)   

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