KEGG   Staphylococcus saccharolyticus: I6I31_04325
Entry
I6I31_04325       CDS       T07353                                 
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
ssac  Staphylococcus saccharolyticus
Brite
KEGG Orthology (KO) [BR:ssac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssac03032]
    I6I31_04325 (gyrB)
   03400 DNA repair and recombination proteins [BR:ssac03400]
    I6I31_04325 (gyrB)
Enzymes [BR:ssac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     I6I31_04325 (gyrB)
DNA replication proteins [BR:ssac03032]
 Prokaryotic type
  DNA Topoisomerases
   I6I31_04325 (gyrB)
DNA repair and recombination proteins [BR:ssac03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      I6I31_04325 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: QQB99102
Position
complement(904472..906397)
AA seq 641 aa
MVNTLSDVNNTENYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWEIVDNSIDEAL
AGYANHIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVEVILTILHAGGKFGGGGYKVS
GGLHGVGSSVVNALSQDLEVYVHRNGKIHHQAYKQGVPQFDLKVIGDTDKTGTAIRFKAD
SEIFTETIVYNYETLQKRIRELAFLNKGIQITLKDERDEEVREDSYHYEGGIKSYVDLLN
ENKEPLHEEPIYIHQSKDDIEVEIALQYNSGYATNLLTYANNIHTYEGGTHEDGFKRALT
RVLNSYGIQSKIIKEDKLSGEDTREGLTAIVSIKHGDPQFEGQTKTKLGNSEVRQVVDRL
FSEHFERFLYENPPVGRIIVEKGIMASRARVAAKKAREVTRRKSALDVSSLPGKLADCSS
KNPEESEIFLVEGDSAGGSTKSGRDSRTQAILPLRGKILNVEKARLDRILNNNEIRQMIT
AFGTGIGGEFDITEARYHKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPP
LYKLTQGKQKYYVFNDRELDKLKQELNPTPKWSISRYKGLGEMNADQLWETTMNPEYRSM
LQVRLEDAIDADQTFEMLMGDVVENRRQFIEDNAVYANLDF
NT seq 1926 nt   +upstreamnt  +downstreamnt
atggtgaatacattgtcagatgtaaacaacacagaaaattatggtgctggacagatacaa
gttttagagggtcttgaagcagtacgtaaaagaccaggtatgtatattggttcaacttcc
gaaagaggtttgcaccacttagtatgggaaattgttgataatagtattgacgaggcatta
gccggttatgctaatcatatagaggtcgtaattgagaaagacaattggataaaagttact
gacaatggccgtggaattcctgttgatattcaagaaaagatgggacgtcctgctgtcgag
gttatcttaactatactccatgccggaggtaaattcggaggtggcggatacaaagtatct
gggggtcttcatggtgttggttcttcggtagttaacgcactttcacaagatcttgaggtt
tatgtacaccgaaatggtaagattcaccatcaagcttacaaacaaggtgtaccgcaattt
gatcttaaagtaatcggagatacagataaaacaggcacagcgatacgttttaaagctgac
tcagaaatctttacagaaacaattgtctataattatgaaaccttacaaaaacgtatacgt
gaacttgctttcttgaataaaggcattcaaattactttaaaagatgaacgtgatgaagaa
gtacgtgaagactcttatcattatgagggcggtattaaatcttatgtagatttattaaat
gagaataaagaacctctacatgaggagcctatctacatacatcaatctaaagatgatatc
gaagttgaaattgcacttcaatacaatagtggctacgcaacaaacttattaacttatgct
aacaatattcatacctacgaaggcgggacacatgaagatggctttaaacgtgctttaaca
cgtgttcttaatagctatggtatccaaagtaagattatcaaagaagataaattatctggt
gaagatacacgtgaaggattaacagcaattgtatctatcaaacatggcgacccacaattc
gaaggacaaactaagactaaattaggtaactctgaggtacgtcaagttgtagatagatta
ttttctgagcattttgaacgtttcttatacgagaatccacccgttggtcgcattattgta
gaaaaagggattatggcatctcgtgcacgtgtggctgctaaaaaggcacgtgaagtaaca
cgtcgtaaatcagcattggatgtttcaagcttaccaggtaaattagctgattgttctagt
aaaaatcctgaagaaagtgagattttcttagtagagggtgactctgccggggggtctaca
aaatcgggtcgtgattcaagaacgcaagcaatattacctttaagagggaaaatcttaaac
gtggaaaaagcacgtcttgatcgtatattaaataacaatgaaattcgtcaaatgattacg
gcgtttggtacaggtattggtggcgaatttgatattactgaagcacgttatcataaaatt
gtaattatgacagatgctgatgtagatggcgcacatattcgtacgttgttactgacattc
ttctatcgttttatgagaccattgattgaagcgggttatgtatacattgctcaaccgcct
ttatacaaacttactcaaggtaaacaaaaatattatgtctttaacgatagagagttagac
aaacttaaacaagaattaaatccgacacctaaatggtcaatctctcgttacaaaggtctt
ggagaaatgaatgcggatcagttatgggagacaacaatgaatcctgaataccgttcaatg
ttacaagtaagacttgaagatgcgattgatgcagatcaaacatttgaaatgttaatgggt
gacgttgtagaaaatcgtagacaatttatcgaggataatgcagtttacgctaacctagat
ttctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (7)   

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