KEGG   Sus scrofa (pig): 100739526
Entry
100739526         CDS       T01009                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
ssc  Sus scrofa (pig)
Pathway
ssc00900  Terpenoid backbone biosynthesis
ssc01100  Metabolic pathways
Module
ssc_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:ssc00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    100739526 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:ssc01006]
    100739526 (GGPS1)
Enzymes [BR:ssc01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     100739526 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     100739526 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     100739526 (GGPS1)
Prenyltransferases [BR:ssc01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   100739526 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 100739526
NCBI-ProteinID: XP_003483520
Ensembl: ENSSSCG00000010155
UniProt: A0A4X1UJ75 A0A287ARC4
Position
14:complement(55907885..55924037)
AA seq 300 aa
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
IDIKKYCVHYLENVGSFEYTRNTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaagactcaagaaacagtccaaagaattcttctagaaccctacaagtacttactt
cagttaccaggtaaacaagtaagaaccaaactttcacaggcatttaatcattggctaaaa
gttccagaagacaagctacagattatcattgaagtgacggaaatgttacataatgccagt
ttactcatcgatgatatcgaagacaactcaaaactccgacgtggctttccagtggcacac
agcatctatggaattccatctgtcatcaattctgccaattatgtatattttcttggccta
gagaaagtcttaacccttgatcacccagatgcagtaaagctttttacccgtcagctttta
gaactacatcagggccaaggcctagatatctattggagggataattacacttgtcccact
gaagaggaatataaagctatggtgctgcaaaagacaggtggactgtttggattagcagta
ggcctcatgcagttgttctctgattacaaagaagatttaaagccactacttaacacactt
gggctctttttccaaattagggatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagcttttgtgaagatctaacagagggaaagttctcattccctactattcatgct
atttggtccaggcctgaaagcactcaggtgcagaatatcttgcgccagagaactgaaaac
atagatattaaaaaatactgtgtacattatcttgagaatgtaggttcttttgaatacact
aggaatactcttaaagagcttgaatctaaagcctataaacaaattgatgcacgcggtggg
aaccctgagctagtagctctaataaaacacttaagtaaaatgttcaaagaagagaatgaa
tag

  All links  
Gene (5)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

Download RDF
DBGET integrated database retrieval system