KEGG   Scomber scombrus (Atlantic mackerel): 133976431
Entry
133976431         CDS       T10651                                 
Name
(RefSeq) actin-related protein 3
  KO
K18584  actin-related protein 3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144  Endocytosis
ssco04517  IgSF CAM signaling
ssco04530  Tight junction
ssco04810  Regulation of actin cytoskeleton
ssco05100  Bacterial invasion of epithelial cells
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133976431
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133976431
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133976431
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    133976431
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133976431
   05100 Bacterial invasion of epithelial cells
    133976431
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133976431
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133976431
   04147 Exosome [BR:ssco04147]
    133976431
Membrane trafficking [BR:ssco04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    133976431
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     133976431
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133976431
  Exosomal proteins of other body fluids (saliva and urine)
   133976431
  Exosomal proteins of bladder cancer cells
   133976431
SSDB
Motif
Pfam: Actin ALP_N FtsA Robl_LC7
Other DBs
NCBI-GeneID: 133976431
NCBI-ProteinID: XP_062270626
Position
24:complement(3336252..3342947)
AA seq 418 aa
MAGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRMMKGVDDLDF
FIGDEAIDKPSYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVK
EFSKYDTDGSKWIKQYTGINAISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKMSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggctggtcggctgccggcttgtgttgttgactgtggcaccgggtacactaagcttggt
tatgcaggaaacacagaacctcagttcatcataccttcatgtattgcaatcaaagagtcg
gccaaggtcggagaccaggctcagcgcaggatgatgaagggggttgatgacctggacttc
ttcatcggggacgaagccatcgacaaaccatcatatgcaacaaagtggccaatccgtcat
ggcatagtggaagactgggacctgatggagaggtttatggagcaggtcatcttcaagtat
ctgcgggcagaacctgaagatcattatttcctcttgacagagcctcccctcaacacacct
gaaaacagagagtatacagcagagatcatgtttgagtcattcaacgtcccaggtctctac
attgctgttcaggctgtcctggcgctggctgcctcctggacatccagacaggtgggagaa
cgcacactgacaggcaccgtgatcgacagtggagatggagtcacgcacgtcatccccgtg
gctgaagggtacgtcatcggtagctgcattaagcacatccccatcgccggtcgagacatc
acatacttcacccaacaactgctgagggagcgagaggtggggatacctcctgaacaatct
ctggaaacagccaaagctgtcaaggagcggttcagctacgtctgccccgacctcgttaag
gagttcagcaagtacgacacagacggctccaagtggatcaagcagtacacgggcatcaac
gccatctccaagaaggagttcacaatcgacgttggctatgagcgcttcctggggcccgag
atcttcttccatcctgagttcgccaacccagacttcacccagcccatctcagaggtggtg
gacgaagtcatccagaactgccccatagatgtcagacgtccgctctacaagaacattgtg
ctctccggaggctccaccatgttcagggactttggcagacgtctgcagagggacctcaag
aggactgtggacgcaaggctgaaaatgagcgaagaactgagcggcggcaagttgaagcca
aagcccatcgatgttcaggtcatcactcatcacatgcagaggtacgctgtctggttcgga
ggatcaatgctggcttcaactcccgagttctaccaagtgtgtcacaccaagaaagactac
gaggagatcggaccgagcatctgccgccacaacccggtattcggagtcatgtcttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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