KEGG   Scomber scombrus (Atlantic mackerel): 133991868
Entry
133991868         CDS       T10651                                 
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1-like
  KO
K05858  phosphatidylinositol phospholipase C, beta [EC:3.1.4.11]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00562  Inositol phosphate metabolism
ssco01100  Metabolic pathways
ssco04020  Calcium signaling pathway
ssco04070  Phosphatidylinositol signaling system
ssco04081  Hormone signaling
ssco04082  Neuroactive ligand signaling
ssco04261  Adrenergic signaling in cardiomyocytes
ssco04270  Vascular smooth muscle contraction
ssco04310  Wnt signaling pathway
ssco04371  Apelin signaling pathway
ssco04540  Gap junction
ssco04621  NOD-like receptor signaling pathway
ssco04912  GnRH signaling pathway
ssco04916  Melanogenesis
Module
ssco_M00130  Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00562 Inositol phosphate metabolism
    133991868
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    133991868
   04371 Apelin signaling pathway
    133991868
   04020 Calcium signaling pathway
    133991868
   04070 Phosphatidylinositol signaling system
    133991868
  09133 Signaling molecules and interaction
   04082 Neuroactive ligand signaling
    133991868
   04081 Hormone signaling
    133991868
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04540 Gap junction
    133991868
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    133991868
  09152 Endocrine system
   04912 GnRH signaling pathway
    133991868
   04916 Melanogenesis
    133991868
  09153 Circulatory system
   04261 Adrenergic signaling in cardiomyocytes
    133991868
   04270 Vascular smooth muscle contraction
    133991868
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133991868
Enzymes [BR:ssco01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.11  phosphoinositide phospholipase C
     133991868
Membrane trafficking [BR:ssco04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Phospholipases
    133991868
 Endocytosis
  Macropinocytosis
   Phospholipase C
    133991868
SSDB
Motif
Pfam: PI-PLC-X PH_14 PLC-beta_C PI-PLC-Y PLCB1-4-like_EFh C2 EF-hand_like DUF4277
Other DBs
NCBI-GeneID: 133991868
NCBI-ProteinID: XP_062286443
Position
12:complement(27915809..27953150)
AA seq 1168 aa
MASAQPGVHALKLQPPSVSDTLRNGSNFTKWDEDLSIVTPLTLHVDPHGFYLYWTDQNKE
TELLDLTHIKDVRTGRSTKTPKEAKLRELLDVGNLVGRLENRVVTVVTASDHVNVNQLNF
IATQEEEAKVWCEELFSLSSNLLSYNLNRDQSLLKAYVRLTLQLNTEGKIPVKNIGRVFS
SDRKRVENALESCKLPYGRGDSVKVDDFTPEVYRSFLESLCPRPELPNIFKLQGANDGSS
LSVDQMTEFINNKQRDPRLNEILYPPLRPAQTHSLIERFQHDQELLKRGVISLQAFASYL
SSDENGVIPPEKLDQSEDMNFPLCNYFINSSHNTYLTAGQLAGSSSVEMYRQVLLAGCRC
VELDVWKGRTAEEEPVITHGFTMTSEIPFKEVIEAIAECAFKTSPFPVILSFENHVDSLK
QQAKMAEYCRSIFGDALLIDPLDKYPLESGAPLPSPQELMGKILIKNKKSHKPAQNTDTK
RLTDQPANQSNEPLSPSNNTGEIEAESEEDDDDDDDEGKKGSAEREAVATEEMSTLVNYV
QPTKFNSFEASKKAARCYHMSSFVETKALEHLTKSPVEFVEYNKSQLSRIYPKGTRVDSS
NYMPQLFWNAGCQLVALNYQTIDLPMQLNLFVFEYNGRSGYRLKPEFMRRHDKHFDPFTE
NTVDGIVANTLSVKVISGQFLTERRVGVYVEVEMFGLPVDTRRKALKTKTSQNNNAVNPV
WDEEPIVFKKVILPTLASLRIAAFEEGGKFIGHRIIPVSAVRPGYRYIGLRNEKNQSLVL
PAVFVYIEVKDYVPDTFADVIEALSNPIRYVNLLEQRSKQLAALTLEDGEEDTQTEDEAD
CCAAERKNDLKSAPVENGLSLASGPAGHTPVATTPKASAARASAANQQAATTDAPKPAAK
TEDLVLSVLIDIPVCTIESLQQSKLYQKDQRRQFKELKELVKRHQKKTSELLREFNNKYK
KTARQCSKSRGSCSDSEKDDRLQQLKDEQQQQLLALRQEQYYSQKYLQREHIKTLTERLS
SLAEEIHNAQMKKLKDICDKEKKELKRQMDRRRTEKINQAKTKEKHLAEEEKIEINKSYV
NEVVQNIKRLEETQTKRHDQLVEQHNQLLQEIQDQKPKLQGAIEAEFQEKFQCLPGEIED
FLQDRKPEVRGHSKSRPSTPHETLSEED
NT seq 3507 nt   +upstreamnt  +downstreamnt
atggcgagcgctcagccgggggtccacgcattgaaactccagcctccctccgtctctgac
acactgaggaacggaagcaacttcactaaatgggacgaggatctgtctattgtgactccg
ttgactctgcacgtggatccacatggattttacctctactggacggaccaaaacaaggag
acagagttgttggacttgactcatataaaagatgtcagaacaggaagaagcaccaaaaca
ccaaaggaggccaagctgcgggagctgctggatgtggggaacctggttggccggctggag
aaccgtgtggttaccgtggttacggcttcagaccatgtaaacgtcaaccagcttaacttc
atagccacacaggaggaagaagcaaaggtgtggtgtgaggaactgttttctctgtcttcc
aacctgctcagctacaatctcaacagagaccaaagtctgctgaaagcgtacgtacggtta
actctgcagctgaacacagaggggaaaattcccgtcaaaaacatcggtcgggtgttttca
tcagacaggaagagagtagagaatgccttggagagctgcaaactgccttacggacggggt
gacagcgtcaaagtggacgacttcactcccgaggtttacaggagttttttggagagtctg
tgtcctcgtccggagctccccaacatctttaaactgcaaggagcgaatgacgggtcgtcg
ctgtcagtcgatcagatgacagagttcatcaacaacaagcagagagacccgaggctcaac
gaaatcctctacccgcctctccgccctgcgcagacacacagtctgattgagaggtttcaa
catgaccaggagctgctgaaacgaggtgtcatctctctccaggcattcgctagttatctg
tccagtgatgagaacggcgtcatcccaccagaaaaactggatcagtctgaagacatgaac
ttcccgctgtgtaactacttcatcaactcatcacataacacatacctgacagcgggccag
ctggcggggagctcctcggtggagatgtacagacaggttctcctggctgggtgccgctgt
gtggagttagacgtgtggaaaggacggacggctgaggaggaacctgtgatcacacacggc
ttcaccatgacttcagaaatcccctttaaggaagtgattgaagccattgcagaatgcgcc
ttcaagacctcacctttccctgtcatattgtcttttgagaaccacgtggactctttgaag
cagcaggctaaaatggctgaatattgtcgatccatctttggagacgcgctgttgatcgat
cctctggacaaatatccgctggagtcgggcgcccccctgcccagtcctcaggagctgatg
ggcaaaatcctcatcaagaacaagaaatctcacaaaccggcccaaaacacagacaccaag
agactgacggaccagccggccaatcagagcaacgaaccactatcgcctagcaacaacaca
ggagagatcgaggctgagagtgaggaagatgatgatgacgacgatgatgagggtaaaaag
ggttcagcagagcgggaagcggtggcgacggaggaaatgtcgactctggtaaactacgtc
caaccaaccaagttcaactcctttgaagcctccaagaaggccgcccgctgttaccacatg
tcgtcttttgtggagaccaaagctttggagcacctcacaaagtcaccagtggagtttgtg
gaatataataaatcccagttgagtcgtatctatccaaaaggaaccagagtcgactcgtcc
aactacatgcctcaacttttctggaacgctggatgtcagctggtggctctcaactaccaa
actatagatttgcccatgcagctgaacctcttcgtgttcgagtacaacggtcgcagcggc
tacagactgaagcctgagttcatgagacggcacgacaaacactttgacccttttacagaa
aacacagtggacggcatcgtagctaacactctctctgtgaaggttatttcaggccagttc
ctgactgagcgtagggtgggtgtgtacgtggaggtggagatgtttggacttcctgtggac
accaggaggaaagcactgaaaaccaaaacctctcagaacaacaacgccgtcaacccggtg
tgggacgaagagcctatcgtgttcaaaaaggtgattcttcctacgctggcttctctgaga
atcgctgcgtttgaggaaggagggaagtttattggtcatcgaattatcccggtgtcagct
gtaagaccaggttatcgttatatcggcctgagaaatgagaagaatcagtctctggttcta
ccggctgtgtttgtctacatcgaagtcaaagactacgtcccggacacctttgcagatgtg
atagaggctctgtccaaccccattcgatatgtcaaccttctggagcagaggtccaaacag
ctggcggctctgacactggaggacggagaggaggacacgcagactgaggatgaggccgac
tgctgtgcggcagagcgtaagaatgatctgaagtcagccccggtggagaacggactcagc
ctcgcctccggccctgcaggacacactcctgtcgccacgacgcccaaagcctctgcagcc
agagcctctgcagccaatcagcaagcagctacaactgatgcacccaaaccagcagcaaag
actgaagatctggttttaagtgttttgatagatatcccagtgtgcaccatagagagtctg
cagcagtccaaactgtaccagaaggaccagagacgtcagttcaaagagctgaaggagtta
gtgaagagacaccagaagaaaacctcagagctcctccgagaattcaacaacaagtacaag
aagacagccagacagtgcagcaagagcaggggttcgtgttcagacagtgagaaagacgac
cgcctccagcagctgaaggacgagcagcagcagcagcttctggctctgaggcaggaacag
tactacagtcagaagtatctacagagagaacatattaaaacgctgacagagcggctgagc
agtctggctgaggagattcacaacgcccagatgaagaaactcaaagacatctgcgacaaa
gagaaaaaagagctgaagagacagatggatcgaaggagaacagagaagatcaaccaggcg
aagaccaaagagaaacatctggctgaggaggagaagattgagatcaataagtcctacgtc
aatgaagtcgtccagaacataaaacggcttgaggagacacagacaaagcgccacgatcag
ctggtggagcagcacaatcagctcctgcaggagattcaagaccagaaaccaaagctgcag
ggagccatagaagccgagtttcaggagaagttccagtgtttgcccggagagatcgaagac
ttcctgcaggacaggaagccggaggttagaggccacagcaagtcccgaccctcgacccct
cacgaaactctgtcggaggaggactga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system