KEGG   Scomber scombrus (Atlantic mackerel): 133992978
Entry
133992978         CDS       T10651                                 
Name
(RefSeq) actin-related protein 3-like
  KO
K18584  actin-related protein 3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144  Endocytosis
ssco04517  IgSF CAM signaling
ssco04530  Tight junction
ssco04810  Regulation of actin cytoskeleton
ssco05100  Bacterial invasion of epithelial cells
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    133992978
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133992978
  09144 Cellular community - eukaryotes
   04530 Tight junction
    133992978
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    133992978
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133992978
   05100 Bacterial invasion of epithelial cells
    133992978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133992978
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ssco04812]
    133992978
   04147 Exosome [BR:ssco04147]
    133992978
Membrane trafficking [BR:ssco04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    133992978
Cytoskeleton proteins [BR:ssco04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     133992978
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133992978
  Exosomal proteins of other body fluids (saliva and urine)
   133992978
  Exosomal proteins of bladder cancer cells
   133992978
SSDB
Motif
Pfam: Actin FtsA Robl_LC7 ALP_N
Other DBs
NCBI-GeneID: 133992978
NCBI-ProteinID: XP_062287770
Position
13:complement(27108131..27132567)
AA seq 418 aa
MASRLPACVVDCGTGYTKLGYAGNTEPQFIVPSCIAIKESAKVGDQAQRRMMKGVDDLDF
YIGDEAVDKPSYSTKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTP
ENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPV
AEGYVIGSCIKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKERYSYVCPDLVK
EFSKYDTDASKWIKQYTGINAISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVV
DEVIQNCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRSVDARLKMSEELSGGKLKP
KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGVMS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atggctagtcgactaccggcgtgtgttgtcgactgcggcacaggttacaccaaactgggg
tatgcagggaacacagagccacagttcatcgttccatcatgtatcgccatcaaagagtca
gccaaggttggagaccaggctcagcggaggatgatgaagggggtggacgacttggatttc
tacatcggtgatgaggcagtagacaaaccttcatattccacaaagtggccaatccgtcat
gggatcgtggaggactgggacctcatggagcgcttcatggagcagatcatcttcaagtac
ctgagggccgagcctgaggatcactacttcctcctgacggagccgcctctgaacacacca
gaaaacagagagtacacagccgagatcatgttcgagtccttcaacgtaccggggctgtac
atcgctgtgcaggctgttctcgctctagccgcctcctggacgtccagacaggtgggcgag
aggacgctgacaggcaccgtcatcgacagcggagatggtgtcacccacgtcatccctgtg
gctgaaggttacgttatcggcagctgtataaagcacattcccatcgcaggacgagacata
acctacttcacccagcagctcctgagagagagggaggtgggcatccctccggagcagtcg
ctggagacggccaaggcagtcaaggagcggtacagctacgtgtgtccggatctagtcaaa
gagttcagcaagtacgacacagacgcctccaagtggattaagcagtacaccggcatcaac
gccatcagcaagaaggagttcaccatcgacgttggttacgagcgtttcctcgggcccgaa
atcttcttccaccccgagttcgccaaccccgacttcacccagcccatctctgaggtggtg
gacgaggtcatccagaactgccccatcgatgtcaggcgtcctctctacaagaacgtggtc
ctatcaggaggctccaccatgttcagagactttggtcgtcgtctgcagagagacttgaag
agatcggtggacgcaagactgaagatgagcgaagagctgagcggaggaaagctcaagccc
aaaccaatcgatgtccaagttatcactcatcatatgcagagatacgccgtttggttcggt
ggatcaatgttagcgtcgactcctgagttctaccaggtctgccacaccaaaaaggactac
gaggagatcgggccgagcatctgtcgccacaatcccgtgtttggagtcatgtcttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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