KEGG   Salvia splendens (scarlet sage): 121744647
Entry
121744647         CDS       T07627                                 
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sspl  Salvia splendens (scarlet sage)
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sspl03041]
    121744647
Spliceosome [BR:sspl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    121744647
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    121744647
SSDB
Motif
Pfam: MA3 MIF4G PRP38
Other DBs
NCBI-GeneID: 121744647
NCBI-ProteinID: XP_041994175
Position
8:complement(2795301..2797575)
AA seq 456 aa
MEIIKYGYVSYGNIVIKLIASPGFTHVSAALISVFNAKFPQVGHLLLRRIVLQLQRAYKR
NDKTQLVAAVKFIAHLLNQRIVDELIGLELLTLLLEKPTDNSVEVAVGFVAECGSLLQDL
CPKGMNLLLFRGILHEGDIDKRVQFLIEGLFALRKAAKFQIMRPELDLVEQDDQFTHQVS
LLDEIDGDGDLDVFQPDPQFVENERMYEDLKRQILPEDEDEDDEDQIADSVDSNEEEDEE
QIKDETGTDLVNLRRTIYLTIKSSLDFEEAGHKLLRIDISVLEKELCXMVLECCGEQTNY
LRYYGLLGQRLCMTNRIYQETFEKCFADQYSKIHQVETVKLINVAKLFAHLLATDALQWR
ILDCIQLTEEETTSSSRIFIKILLQELSGHLGLRLLNQRLSQDSFESIFPKDNPKNTRFA
INFFTSIGLGGITENQRDYLKNMQNEGKQKKRKVNV
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggaaataatcaaatatggatatgtttcgtatggaaatatagtgattaagttgatcgcg
tcgccgggattcactcacgtttccgcagctctgatttctgtcttcaacgccaagttccct
caagtaggccatcttttgctgcggaggatcgtactgcaactgcagagggcgtataaacgc
aacgacaagacacaactagttgcggcggtgaaattcatagctcacctgttgaatcagcgg
atagttgatgagcttatcggccttgagctgctgacgttgctgctggagaagccgaccgat
aatagtgttgaagtagctgttgggtttgttgcagaatgtggatccttgctgcaggacctt
tgccccaaaggaatgaatttgttattgtttagagggattcttcacgaaggagatatagat
aagcgtgtccagttcttgattgaaggcctctttgcgttgcggaaggcagcaaagtttcag
attatgcgtccagaactggacctggtggagcaggatgaccaattcactcatcaagtttct
ctcttggatgagatagatggtgacggtgatttagatgtcttccagccagatccccagttc
gtggagaatgagaggatgtatgaggacctaaagaggcaaatactacctgaagatgaagat
gaagatgatgaagaccaaattgcagattcagtggatagcaatgaggaagaggacgaggag
cagataaaagacgagaccgggacagacttggttaacctccggagaaccatctatttgaca
atcaagtcaagtcttgattttgaagaagctggacacaagttgttgaggatcgacatatct
gttctggagaaggagctgtgtnncatggttttggagtgttgcggtgagcagacaaattac
ctccgctattacggactcctcgggcagaggttgtgcatgacgaacagaatataccaggag
acatttgaaaaatgttttgccgaccagtactccaaaattcaccaggtggagacagttaaa
ctgataaatgtcgcaaaactattcgctcatttgctggccacggacgcgttgcagtggcgc
atcttggactgcattcagttgaccgaagaggagactacttcttcgtctcggatcttcatc
aagattctcttgcaggagctgtccggacacctgggactccggttgcttaatcaacgcctg
agtcaagactctttcgagtctatttttcccaaggacaatccgaagaacactaggtttgct
atcaacttcttcacttccataggacttggtgggatcacagagaaccagcgtgattatctc
aagaacatgcagaacgaaggcaagcagaagaaaaggaaagttaatgtatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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