KEGG   Salvia splendens (scarlet sage): 121776262
Entry
121776262         CDS       T07627                                 
Name
(RefSeq) transcriptional regulator ATRX homolog
  KO
K03504  DNA polymerase delta subunit 3
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03030  DNA replication
sspl03410  Base excision repair
sspl03420  Nucleotide excision repair
sspl03430  Mismatch repair
sspl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121776262
   03410 Base excision repair
    121776262
   03420 Nucleotide excision repair
    121776262
   03430 Mismatch repair
    121776262
   03440 Homologous recombination
    121776262
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sspl01009]
    121776262
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sspl03032]
    121776262
   03400 DNA repair and recombination proteins [BR:sspl03400]
    121776262
Protein phosphatases and associated proteins [BR:sspl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     121776262
DNA replication proteins [BR:sspl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    121776262
DNA repair and recombination proteins [BR:sspl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      121776262
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     121776262
SSDB
Motif
Pfam: DUF5986 Atrophin-1
Other DBs
NCBI-GeneID: 121776262
NCBI-ProteinID: XP_042029356
Position
18:complement(1171100..1174835)
AA seq 274 aa
MWGRASAAPKPDACLVQADKARQGSSVSAEAQICARESAIHEISDDDDDDEDKAFSARRT
SNGEGSRKRKVVFNCSDEEDEYGNAINLGSPDPPKKSTLYSKESLNAFTTECNLSFVEKE
NKPKVQEEKKSDVKAKPKVKEEKERDVKGMPKVKEEKESDVKANQHLGEKVATASDVPKR
RKVVKTRIDERGREVTEVVWEGEEQDAKSNNNSSAKIAGSNTVSNATNRPPVARKLPAVG
NAAPANQPGKAGNKKAATKDPKQGNLFSLSTCRN
NT seq 825 nt   +upstreamnt  +downstreamnt
atgtggggtcgtgcatcagcagcacctaagcctgatgcttgcttggttcaagctgacaaa
gccagacaaggctcttctgtcagtgcggaagctcaaatatgtgctcgtgaatcagctata
catgaaattagtgatgatgatgatgatgatgaggacaaagctttcagtgcaaggagaacc
tctaatggtgaaggcagtagaaagagaaaagttgtatttaattgctccgatgaggaggat
gaatatggcaatgccataaatctagggtcacctgatcccccaaagaagtctactctatac
tccaaagaaagtttaaatgctttcaccacagagtgcaatttaagtttcgtggagaaggaa
aataagccaaaggtccaagaagagaaaaaaagtgatgtaaaagctaagccaaaggtaaaa
gaagagaaagaaagagatgtgaaaggtatgccaaaggtcaaagaagagaaagaaagtgat
gtaaaagctaaccagcatttgggagaaaaggtcgcaactgctagtgatgtgcctaaaaga
agaaaagtggtaaagacacgaattgatgagcggggaagagaagtcactgaagttgtttgg
gagggtgaggagcaagatgcaaaatctaacaataattcttcagccaaaattgctggcagt
aatacagtgagcaatgcaactaacaggcccccagttgctcgtaagttgccagcagtgggg
aatgctgctccagcaaatcaacccgggaaagctggaaataaaaaggcagcaactaaggat
cctaagcaaggaaatctcttctcattgagtacatgtagaaactaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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