KEGG   Solanum stenotomum: 125841670
Entry
125841670         CDS       T08385                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC125841670
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sstn  Solanum stenotomum
Brite
KEGG Orthology (KO) [BR:sstn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sstn03041]
    125841670
Spliceosome [BR:sstn03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    125841670
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    125841670
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2
Other DBs
NCBI-GeneID: 125841670
NCBI-ProteinID: XP_049376795
Position
10:872511..878030
AA seq 923 aa
MEKDLSENRYRRRRNDEDVKKVERQRHRDRSSSDDDDERGDRKARRRVSERESGDDGRGD
RRARSRTIEHESGDDDGGGNNGKDDRRLSRRRTERGISDDDSKRKSQRDEREDSAERGDR
RPKEEXEEDDDDGERDKTRERRRKSERVDDDEKDDRRERRRRNDREDDAGRDDRRQRRPK
DGSEEDDERRDGRKESRKNVCQVDEDVERDDRSKRKRRHEGEDGDVKDDRKEMSRRNGDE
RNDRKDRNRNNGDDWKEKKQRESDDEKVQKRREGRVDRYNDDRKEKRRNVEREKKDDGDD
HDRKDTRQRIGTDKHGKDKNREDNTQEDGALKASEVSKVQKQDGNLNIDRAKLGRSGGVY
IPPFKLARMMKEVQDKSSVEYQRMTWDALRKSINGLVNKVNAANLKNIIPELFAENLIRG
RGLFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIILQLQRAYKRNDKPQL
LAAVKFIAHLVNQQIVHELIALELLTVLLEKPTDDSVEVAVGFVTECGSMLQDLCPRGLH
GIFERFRGILHEGEIDKRVQFLIESLFALRKAKFQGYQAVRPELDLVEQEDQLTHEVSLS
DTIDPEITLDIFKPDPNFLENERKYEELKKAILGEESEEGDSDAESEDEDDNEDEESEEE
DEEQMQIKDETETNLINLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECC
SQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGT
DALPWHALAYIRLTEEDTTSSSRIFIKILFQEMSEHLGIRLLNERLNDPTMQDSLDSIFP
KDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKPVSESDDESGSSGSGSES
SSSSSDDSDSESDDSRRKRRRRR
NT seq 2772 nt   +upstreamnt  +downstreamnt
atggagaaggatttgagtgagaatagatatcgtaggagaaggaacgatgaggatgtgaag
aaagtagagcggcaacggcatagggatagaagcagctcggatgatgacgatgaaagaggt
gataggaaggcgaggaggcgagtaagtgaacgtgaaagtggtgatgatggaaggggggat
aggagggcgaggagtcgaacaattgaacatgaaagtggtgatgatgatggtggtggtaat
aatggaaaggatgataggaggttgtcgaggcgaagaactgaacgtggaattagtgatgat
gattcgaagcggaagagtcaaagagatgaacgtgaagatagtgctgaaaggggtgatagg
aggccaaaagaagaataggaagaagatgatgatgatggtgaaagagataaaacgagggag
aggaggagaaaaagtgaacgggtagatgatgatgagaaggatgataggagggagagaaga
cgaagaaatgaccgtgaagatgatgctggaagggatgacagaagacagaggaggccaaaa
gatggaagtgaagaagatgatgaaaggagggatggtaggaaggaaagcagaaaaaatgta
tgccaagttgatgaggacgttgaaagggatgataggagtaagaggaaacgacgacatgaa
ggtgaagatggtgatgtaaaggatgataggaaggagatgagtcgaaggaatggagatgaa
agaaatgataggaaggataggaatcgaaacaatggagatgattggaaggagaagaagcaa
cgggagtctgatgatgaaaaggtgcaaaagagaagggagggtagggttgatcggtataat
gatgataggaaagagaagaggaggaacgtagaaagagaaaagaaggatgatggtgatgac
catgatagaaaggatacaaggcaaaggattgggactgataagcatggaaaagacaaaaat
agggaagataatacccaagaagatggggcactgaaagccagtgaggtttccaaggtgcaa
aagcaagatggtaatttgaatatcgatagagcaaaattgggcaggagtgggggagtgtac
attccaccattcaaattggctaggatgatgaaggaggttcaggacaagagcagtgttgag
taccagaggatgacttgggatgctctgagaaagagtatcaatggactggtgaataaagtt
aatgcagcaaacctcaaaaacattattccagagttgttcgcagagaacttaattcgaggg
aggggtttgttttgtagatcctgtatgaagtcccaaatggcttctccgggttttactgat
gtgtttgctgctttggttgcggtcgttaataccaagttccctgaagtgggtgatcttttg
ttaagaaggatcatactgcagctgcaaagagcttataaacgtaatgataagcctcagctg
ttagcagctgtcaaatttattgctcaccttgtgaaccaacaaatcgtccacgagcttatt
gctcttgaactactcacggttttgttggagaaacctactgatgatagtgttgaggttgcg
gttggttttgttacagaatgtggttcaatgcttcaggacctctgtccacgaggattacat
ggaatctttgagcggttccgtggtatacttcatgaaggagaaatagataaacgtgttcag
ttcttaattgaaagcctctttgcattgcgtaaagcaaagtttcagggttaccaagctgtg
cgtccagaacttgaccttgttgagcaggaagatcaattaacacatgaagtctctctctca
gatacaatagatccagaaattactttagatattttcaagccggatcctaatttcctagag
aacgaaagaaagtatgaagaattaaagaaggcaatacttggtgaagaatctgaggaagga
gattctgatgcggaatcagaggatgaagatgacaatgaagatgaagagtctgaagaagaa
gatgaggagcaaatgcaaataaaggacgaaacagagacaaacttaatcaaccttcggaga
acgatctaccttactattatgtctagtgttgactttgaagaagcagggcataagctgttg
aaaatcaaactagagcctggtcaggagatggaattgtgcataatgttattggagtgctgc
agtcaggagaggacttatcttcgttactatggactactgggacagcgattttgcatgatt
aacaaaatccatcaagaaaactttgagaaatgctttgtgcagcagtactccatgatccac
cggctcgaaactaataaacttcgtaacgtggccaagttttttgctcatttgctcggcact
gatgctcttccttggcatgctttggcttatataaggctgacagaggaggacacaacctct
tcttctcgtatatttattaaaatcctattccaggaaatgtcggagcaccttggcatccgc
ttgttgaatgagcgtcttaacgaccccaccatgcaagattcccttgactctattttcccg
aaggacaatcccaagaatacaaggtttgctatcaactttttcacttccattggtctcggt
ggaattactgaaaatctacgagagtatttaaagaacatgccaaggcttatcatgcaacaa
caaaagcccgtttctgaatcggatgatgagtctgggagttctggttcaggatctgaatca
tcatcatccagttctgacgacagtgatagtgaaagtgatgatagtcgaaggaagcggagg
aggagaagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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