KEGG   Salmo trutta (river trout): 115154887
Entry
115154887         CDS       T08542                                 
Name
(RefSeq) platelet-derived growth factor receptor beta
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
stru  Salmo trutta (river trout)
Pathway
stru04010  MAPK signaling pathway
stru04020  Calcium signaling pathway
stru04510  Focal adhesion
stru04518  Integrin signaling
stru04519  Cadherin signaling
stru04540  Gap junction
stru04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:stru00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115154887
   04020 Calcium signaling pathway
    115154887
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    115154887
   04519 Cadherin signaling
    115154887
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115154887
   04540 Gap junction
    115154887
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115154887
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:stru01001]
    115154887
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:stru04090]
    115154887
Enzymes [BR:stru01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     115154887
Protein kinases [BR:stru01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   115154887
CD molecules [BR:stru04090]
 Proteins
  115154887
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Ig_PDGFR_d4 Pkinase Ig_3 I-set ig VEGFR1-3_N_Ig-like Ig_2 V-set Ig_VEGFR-1-like_5th Ig_MYOM1 VEGFR-1-like_Ig-like C2-set_2
Other DBs
NCBI-GeneID: 115154887
NCBI-ProteinID: XP_029557435
UniProt: A0A674D1L7
Position
19:49062086..49086510
AA seq 1109 aa
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFAVLLQFCPEGFSLELSPSEKEVILSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEESSTQETKD
ISVFVPDPEEWFLPLRQAVVMKEGEEGTIHCMVTDPGINVTLYERDNKASVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEIVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLEDSGQYICRVQDPFSGKSA
MDNLTVTVLERGFVDLEPSINTNVSALQYQSVELKVQIEAYPKPQVLWTRDNTTLTGETV
SMDTRQVHETSYLSTLTLVRVRMEQRGLYTVQVANEDDVKEITFDLQVKSPPKIIDLSDQ
HMDQGHGVLCVTEGVPTPTIHWYSCESIGKCSNKTTAWKSLSADQDNVSIQMNVSYIEAS
GVNHVRSLLTFQTMGGITSVRCEARSERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLIILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLRHSQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLADYLHRNKHTFLQYYADKNRRDADMCRNSTESTVQIQ
GKSESDGGYMDMTKEESLNYVPMQELSDNIKYADIEPSVNETPYHQDNNYQGQGQERADV
PLSISDSPILSYTDLVGFSYQVAKGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGNTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYAALKRGYRMPKPPHATDEIYDVMCKCWDEKFKKRPLFSSLVNLTGNLLTDAYKK
KYTQVNESFLKSDHHAAIRSKPIPAGNPAVSSDDHSSGDRAGQETGETGEIGETGKEAGP
SQTDYIIAIPDIHVVEEAEAGGEVLDTATQSTSSPPSTTDQTDTDTASLDGPEASLEEPV
PTEEEVPPPTQEDKLPQSPCTPEVEESFL
NT seq 3330 nt   +upstreamnt  +downstreamnt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttgcagtgctgctgcagttttgtccagag
ggcttcagtctggagctcagccccagcgagaaagaggtcatactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacgtggaagtctccccacgaccccagc
ctggagggagtggctgtggaggacaggggaaccaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagtcctctacacaggagaccaaggac
atatcggtgtttgtaccagaccctgaggaatggtttcttcccctgcggcaagcagtagtg
atgaaggagggagaggaaggtaccattcactgcatggtgactgaccctggcattaacgtg
accctgtacgagagggacaacaaggcctctgtggagggaacataccaccccagtaaaggg
ttcaccgccatcctgaaagatagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagcattgtggtccccaaatccatgaacgccttc
atgacactctcaaagactgtgctgaaacaaggcgaggccttaatggttaattgtactgta
gaagaagcagagatagtttacttcgaatgggattttcctcgtaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgtcact
ctggaggactctggccagtacatctgccgagtgcaggaccctttttccggaaagtcagcc
atggataatctcactgtcactgttctggaacggggctttgtggatttggaaccctccatc
aacactaatgtttcagcgctgcagtatcagagcgttgagctcaaagtgcagattgaagcg
tatcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccatggacaccagacaggtgcatgagaccagttacctcagtactctgaccttggtaagg
gtcaggatggaacagaggggcctctacactgtccaggtggccaatgaagacgacgtcaag
gagataacctttgatcttcaagtcaagtctcccccgaagataatagatttgtctgaccag
catatggaccagggccacggggtgctctgtgtcacagagggggtccccacacccaccatt
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcgtggaagtct
ctgtcggctgaccaagacaacgtcagcatccagatgaacgtgagctacatcgaggcctca
ggggtcaaccacgtccgcagccttttgaccttccagaccatggggggtattacatcagtg
cgctgtgaagcccgcagcgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctctgttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcatcatcctcatcgctctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtgagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggtacctcgggacagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggccacagcctatggccttcgtcactctcag
tccaccaccaaagtggctgtgaagatgctaaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacatcgtcaac
ctactgggggcttgtacgaaacgaggtcctatttacctcataactgagtactgttgctat
ggtgacctggctgactaccttcaccgcaacaagcataccttcctgcagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtacagtccaaatccaa
ggaaaaagtgagagcgatgggggttacatggacatgaccaaggaagaatctttaaattat
gtcccaatgcaagagctgagtgacaacatcaagtatgcagacatcgagccttcagtcaat
gagacaccctaccatcaggacaacaactaccaaggacaaggccaagagagagcagacgtc
ccgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaagggcatggactttctggcgtccaagaattgtgttcatcgtgacctggct
gccagaaacgttctcatctgcgagggaaagctggtgaagatctgtgactttggcctggcc
cgtgatgtcatgaacgactccaactacatagccaaaggcaacacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaacgaacagttctacgctgccttgaagagaggctacaggatgcctaaaccccctcat
gctacagacgagatctatgacgtcatgtgcaagtgttgggatgagaaattcaagaagagg
ccactgttctcctctctggttaatttgacgggaaacctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagagcgaccaccacgctgcgatcaggtcc
aaacccataccagcagggaacccggctgtgtcttcagatgaccactcctcaggggatcga
gcgggtcaggagacaggggagacgggggagataggggagactgggaaggaggctggcccc
tcccagactgactacataatcgccatcccagatatccatgtagtcgaagaggcagaagca
ggtggtgaggtgctggacaccgccacacagagtacatcaagtcctccaagcacaaccgac
cagacagatactgatacagcctccctggatggaccagaagcatccctagaagaaccagta
cccacagaggaagaggtgcctccccccacgcaagaagacaagctcccccagtctccatgt
acccctgaagtggaggagagtttcctgtag

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (19)   

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