KEGG   Salmo trutta (river trout): 115159423
Entry
115159423         CDS       T08542                                 
Name
(RefSeq) rab11 family-interacting protein 1-like isoform X1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
stru  Salmo trutta (river trout)
Pathway
stru04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:stru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115159423
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:stru04131]
    115159423
Membrane trafficking [BR:stru04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    115159423
SSDB
Motif
Pfam: C2 RBD-FIP
Other DBs
NCBI-GeneID: 115159423
NCBI-ProteinID: XP_029564984
Ensembl: ENSSTUG00000004097
Position
23:14242597..14271685
AA seq 1597 aa
MSLSDQSQQWYPTSVKVTVLQARSLRIKGKNGTNDSYAIMQVAKDKFSTSVAEKSVAPVW
KEEATFELPLFHNGNTEKCTLHVHVMHRALVGSDKLLGHAVINLLELSEVKSRNKTDWHK
LLDKAGKPDKDRGEVLVDIQFMRNNLTASMFDLSATDKPRSRLGKFKDKVRGKKKEGLSD
SASAVVPSCTQVLTDSEGEGEGEGGADKEEKKKKNKLKSLFSPKSNLQRHGLSQSMSVLG
PLPEKNSSLSGSPSGLNEDSSEGKNKFKFLTHKRTGSSDSKASQGSLSLGRSKIPAPLAE
QSNLCINGSHVYTEHPQPRSARTGSTFSLASSGHGSMEDLRRAQGRKSSSTSMDSLTALK
QPSPWAEVESSRAEEEEEEEEEEEEEERVKLDEMKRKEEQERKKLEEEERMRKEEQEKRR
IGKEVERLRFEEERKRIEEEKLRFEEEEKTRKREQENRKRMEEEKIRVEEESRMMEERKR
RLKEEGEEREKKKEQEMIRLQEEMEEQERWEEEERMRREEHERMKREDRLRKEDERKMRE
VEERLKREKEERIKEEEERIRREQEEDMQRREERERKMREEEERLRAEEEMREEEERMKR
EQDRVREEEERMKREQDRLREEERRVMEEEERVKREQDRLREEERRVREEEERVRKAEEE
ERLREEMGIKRTEEEERIKREEEDRLRKEEEERKEEERIRILENEMLRKDEEQRKIWKEE
ERIRRLEEEMLRKEEEQRKIRMEEERIRRLEEEMLRKEEEQRKIRMEEERIRRLEEEMLR
KEEEQRKIRMEEERIRRLEEEMLRKDEEQRKIWKEEETIRRLEEERLRKEEAETMRLEEE
ERGNEQERRDKEQKERFRVEEENVKKEELRQEEKRRSAQMEEEQRREEAEKQMEQNSEAK
VTVCNNPFEEASPTSSFDTSSNNLFEENPMTTTGPISCRINKVSAVKPRPSSWGNPSKPA
ISSNPFLSSSSPELESSMDSPRGDGETGDAIDPSTDLMEKKDPDPVAPNNQPWARKDNWP
SKSHCATPTLAKTKPTKPPPPLRRQSSTSLVGSGDDRGSVSGKDHSSVRQDKGPAPLPPD
NQRWAHKDNWPSKSNPESATPTLTQKTATKPQPPPRRHSATSLVGSEHDQHLNESVSQDD
SSVRRDKRPAPLPPDRPIQAPSQTQRDQSMTSVNQGHKDRVGASMSKVSQRVVQMITPLR
SSSTATTEHISGGQSSAHHGNQAEEPMPSATGGLMVAKHNKGPAPSRPQHLPGKTMPTVD
VLDEQSNTEEHDSSVEFGPNNPFAEDCRMEKSSGCGEEQSLTGERQESLDSHNQQSCTST
DADLGPFQKHVVGDTTELPTPDVLPAEDVSCPTKSTSAKRARAPLPPVKITSTFREEGAG
KRSSGKLQSPGAPTSSKLSSGNWVKKQNCGVGVALPCVTLAQPPCFPSPAPSAIPHPEPL
KGSGGRRDCPPQTTSSVPGQKTLLHAGALPSITEQCSGEEAGGRGDRSASSTCRPHPVKP
LSSLENQPASNIHEEQAGKCTGILGGLQEKIKVKDTGVKGPYSQLTQEELISLVVKQQEQ
LSKRGNKIKELEQYIDNLLVRIIEEQPSILMTMNSLK
NT seq 4794 nt   +upstreamnt  +downstreamnt
atgtctctatcggaccagagccaacagtggtatcccaccagcgtaaaggtaactgtgctt
caggcaagaagcctgaggataaagggaaaaaatggcaccaacgactcatacgctatcatg
caagtggccaaggataaattctctacgtcggtggcagaaaagagcgtggcaccggtgtgg
aaagaggaggccacgttcgagctgccgctcttccacaacggtaacacagagaagtgtacg
ttgcatgtccacgtaatgcaccgggctctcgtgggatcggacaagttgctcgggcacgca
gtcatcaacctgttggagctcagcgaggttaaatcccgcaataagactgattggcataag
ctgttggataaggcaggcaagccagacaaagacaggggagaggtgctggtggacatccag
tttatgaggaacaacctgacagccagcatgttcgacctctctgctacagacaagcctcgc
tcccgcctgggcaagttcaaggacaaggttcgaggcaagaagaaggagggtctgtcggac
tcagcgtctgccgtggtgccgtcctgcacccaggttctgacggacagcgagggagagggg
gaaggggagggaggtgcagacaaagaagagaaaaagaagaaaaacaagctgaagtctctg
ttttctcccaagtctaatctgcagcgtcacggactgtcgcaatccatgtctgtcctgggc
cctctgcctgagaagaactcctcactgagtggcagcccctcaggcctcaacgaggactcc
tctgaaggtaaaaataaattcaagtttctgacccataagcgcacaggcagttccgacagt
aaggcttctcagggctccttgtctctagggcgctctaagatccctgccccgcttgcagag
cagagtaacctgtgcatcaacggcagtcacgtgtacacagaacatccccagccccggagc
gcacgcaccggctccaccttcagccttgccagctcaggccatggttccatggaagaccta
cgcagggcccagggccgtaagagctccagcacctccatggactctctcacggccctgaag
cagccctcaccctgggcagaggtggagagcagcagggcggaagaggaggaggaggaggag
gaggaggaggaggaggaagaaagagttaaactggacgagatgaagagaaaggaagagcag
gagagaaagaagttagaggaggaagagaggatgaggaaggaggaacaagagaaaaggagg
attgggaaggaggtagaaagacttaggtttgaggaggagaggaaacggattgaagaggag
aagttgaggtttgaggaggaagagaaaacaaggaaacgggagcaggaaaacagaaagagg
atggaggaggaaaagattagggttgaggaggaaagtagaatgatggaagagaggaagagg
agactgaaggaggagggagaggagagggaaaagaagaaagaacaggaaatgattaggtta
caggaggaaatggaggaacaagagaggtgggaagaagaggaaaggatgaggagagaagag
catgaacgaatgaagagggaggatagactgaggaaggaggacgagaggaaaatgagggag
gtggaggaaagattgaagagggagaaagaggagaggattaaggaggaggaagaaaggatt
aggagagaacaagaggaagatatgcaaagaagggaggaacgggagaggaagatgagggag
gaagaagaaagactaagggctgaagaggagatgagggaggaggaagaaagaatgaagagg
gagcaggatagagtgagggaggaggaagaaagaatgaagagggagcaggatagactgaga
gaggaggagagaagagtgatggaggaggaagaaagagtgaagagggagcaggatagactg
agagaggaggagagaagagtgagggaggaggaagaaagagtgaggaaggccgaggaggaa
gagaggctgagagaggaaatggggataaagaggacagaggaggaggaaagaattaagaga
gaagaggaggataggctgagaaaggaggaagaggagaggaaggaggaagagaggatcagg
atattagagaatgagatgttgaggaaggatgaagagcagaggaagatctggaaggaggaa
gagaggataaggagattagaggaggagatgttgaggaaggaggaagagcagaggaagatc
aggatggaggaagagaggataaggagattagaggaggagatgttgaggaaggaggaagag
cagaggaagatcaggatggaggaagagaggataaggagattagaggaggagatgttgagg
aaggaggaagagcagaggaagatcaggatggaggaagagaggataaggagattagaggag
gagatgttgaggaaggatgaagagcagaggaagatctggaaggaggaagagacgataagg
agattagaggaggagaggctgaggaaggaggaagcagaaacaatgaggcttgaagaagaa
gaaagggggaatgaacaggagaggagggataaggagcagaaagaaagatttagggtggag
gaagaaaatgtgaaaaaagaggagttgagacaggaagagaaaaggagaagtgcacagatg
gaggaagagcaaaggcgtgaggaagctgagaagcagatggagcagaatagcgaggcgaag
gtcaccgtatgcaataatccttttgaggaagcctctcccaccagttcatttgacacctct
tcaaataatctgtttgaggagaaccctatgaccactactggacccatcagctgccggata
aataaagtatcagcagtcaagccaagaccctcttcatgggggaacccttcaaagcctgct
atatcttccaaccccttcttatcgtcctcgtctcctgaactggagagttctatggactcc
cccagaggcgatggggaaaccggagacgctattgacccgtctactgatctgatggagaag
aaagaccctgaccctgtggctcccaacaatcagccctgggctcgtaaggacaactggccc
agtaaatctcattgtgccacacctaccctcgctaaaacaaagccaacaaaaccgccccct
cccctcagacgtcaatcttccacgtcattggtgggaagtggggatgaccgggggagtgtt
agtggtaaggaccattccagtgtcagacaggataagggcccagctccactgcctccagac
aaccagcgatgggctcataaggacaactggcccagtaagtccaaccctgaatctgccact
cctaccctcacccaaaaaacggcaacaaaaccacagcctcctccaagacgccactctgcc
acgtcattggtgggaagcgaacatgaccagcacttaaatgagagtgttagtcaggatgat
tccagtgtcaggagggacaagcgtcctgctccactgcctcctgacagaccaatccaggct
ccaagccagacacagagggaccagagtatgaccagtgtgaatcagggacataaggacaga
gtgggtgcctccatgtccaaggtttctcaacgtgtggtacagatgatcacaccactgaga
tcttcctccacagctacaacagaacacatcagtggaggccagagctctgcccaccatggg
aatcaagcagaggaacccatgccatcagccactggggggttgatggttgcgaaacacaat
aaaggtccagcaccctccaggccccagcaccttccagggaagacaatgccaacagttgat
gtgttagatgagcaatcaaatactgaggaacatgactcttcagttgagtttggtccaaat
aatccctttgcagaagactgcagaatggagaagtcctctggatgtggtgaagaacagagt
ctaactggtgagcgtcaggagagcctggactctcacaatcaacagagttgtacctccaca
gatgcagatctaggtccgtttcagaagcatgtggttggggacacaactgagcttccaacg
ccagatgttctgccagctgaggatgtctcctgtcccaccaaaagcacatcagcaaagcgg
gcccgtgctcccttgcctccagtgaagataacatccacctttagagaggagggagctggt
aaacggagttctggaaaactacaaagcccaggggctcccacttcgagtaagctttcctca
ggtaactgggtaaaaaagcagaattgcggagtgggtgtggcactaccatgtgttaccctt
gcccagcccccatgtttcccctcacctgccccctccgccataccccaccccgagcccctg
aagggatcagggggcaggagagactgccctccccagacaacaagctctgtccctggccag
aagaccctgcttcatgctggagctctgccctccattacagagcagtgcagtggagaggag
gcaggagggagaggggacaggtctgcctcaagcacatgcaggccacacccagtaaagccc
ttgagttccctggaaaaccagccagcctccaacatccacgaggaacaggctggcaaatgt
acagggatcctcggtggccttcaagagaagataaaggtcaaagacacaggggttaaaggt
ccctactcccagctgacccaggaagagctgatctccctggtggtgaagcagcaggagcag
ctctccaaaaggggcaataagatcaaggagctggagcagtacattgacaacctgctagtg
cgcatcatcgaggagcaacccagtatcctgatgaccatgaactcactcaaatga

  All links  
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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