KEGG   Streptomyces qaidamensis: A4E84_17940
Entry
A4E84_17940       CDS       T04777                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
stsi  Streptomyces qaidamensis
Pathway
stsi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:stsi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A4E84_17940
  09124 Replication and repair
   03420 Nucleotide excision repair
    A4E84_17940
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:stsi03021]
    A4E84_17940
   03400 DNA repair and recombination proteins [BR:stsi03400]
    A4E84_17940
Enzymes [BR:stsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     A4E84_17940
Transcription machinery [BR:stsi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     A4E84_17940
DNA repair and recombination proteins [BR:stsi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     A4E84_17940
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom ETAA1 IMD AAA_22
Other DBs
NCBI-ProteinID: AMW11217
UniProt: A0A143C148
Position
4107437..4109080
AA seq 547 aa
MNGPLIVQSDKTLLLEVDHEQADGCRRAIAPFAELERAPEHIHTYRVTPLGLWNARAAGH
DAEQVVDALVQYSRYPVPHALLVDIAETMDRYGRLTLSKHPAHGLVLTTTDRPVLEEILR
SKRVTPLVGARIDPDTVVVHPSERGQIKQTLLKLGWPAEDLAGYVDGEAHEIELAEDGWA
LRPYQKQAVENFWHGGSGVVVLPCGAGKTLVGAGSMAQAKSTTLILVTNTVSARQWKHEL
VKRTSLTEDEIGEYSGTKKEIRPVTIATYQVLTTRRKGVYPHLELFDSRDWGLIVYDEVH
LLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAPA
DCVEVRVNLTDSERLAYATAETEEKYRFCATTATKRKVTEAIVRRFAGQQILVIGQYIDQ
LDELGEHLGAPVIKGETSNAQREKLFDAFREGEISVLVVSKVANFSIDLPEATVAIQVSG
TFGSRQEEAQRLGRVLRPKSDGHQAHFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIMDA
DELLAES
NT seq 1644 nt   +upstreamnt  +downstreamnt
gtgaatggtccgctgatcgtccagtccgacaagaccctgctcctggaagtcgaccacgag
caggccgacggctgccgccgggccatcgccccgttcgcggaactggagcgggcgccggag
cacatccacacctaccgtgtgacgccgctgggcctgtggaacgcccgcgcggcggggcac
gacgccgagcaggtcgtggacgcgctcgtgcagtacagccgctacccggtgccgcacgcg
ctgctcgtcgacatcgccgagacgatggaccgctacggccgtctcaccctctccaagcac
cccgcgcacggactggtcctgaccaccaccgaccgcccggtgctggaggagatcctgcgg
tcgaagcgggtcacgcccctggtcggcgcccgcatcgacccggacacggtcgtcgtgcac
ccctccgagcgaggccagatcaagcagacgctgctgaagctgggctggccggccgaggac
ctcgccgggtacgtcgacggcgaggcgcacgagatcgagctggccgaggacggctgggcg
ctgcggccgtaccagaagcaggccgtggagaacttctggcacggcggttcgggcgtggtc
gtcctgccctgcggcgccgggaagacgctggtcggcgccgggtcgatggcccaggcgaag
tcgaccaccctcatcctcgtcaccaacaccgtctccgcgcggcagtggaagcacgagctg
gtgaagcggacgtcgctcaccgaggacgagatcggcgagtacagcgggacgaagaaggag
atccggcccgtcacgatcgccacgtaccaggtgctgacgacccggcgcaagggcgtctac
ccgcacctggagctgttcgactcgcgggactgggggctgatcgtctacgacgaggtgcac
ctgctgcccgcgccggtcttcaagttcaccgccgacctccaggcgcgccggcggctcggt
ctgaccgccaccctggtgcgcgaggacggccgcgagtcggacgtgttctccctgatcggt
cccaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgcccgcc
gactgcgtcgaggtccgggtcaatctgaccgactccgagcggctcgcgtacgccacggcc
gagacggaggagaagtaccgcttctgcgcgacgaccgcgacgaagcggaaggtgaccgag
gcgatcgtgcggcggttcgccgggcagcagatcctcgtgatcgggcagtacatcgaccag
ctcgacgagctcggggagcatctgggcgcgcccgtgatcaagggcgagacgtcgaacgcg
cagcgggagaagctcttcgacgccttccgcgagggcgagatcagcgtgctcgtcgtgtcc
aaggtcgcgaacttctcgatcgacctgccggaggcgacggtcgccatccaggtctcgggc
accttcggctcccggcaggaggaggcccagcgcctcggccgggtgctgcgccccaagtcc
gacggccaccaggcgcacttctactcggtggtcgcccgggacaccatcgaccaggacttc
gcggcccaccgccagcgcttcctggcggagcagggctacgcgtaccggatcatggacgcg
gacgagctgctggcggagagctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

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