Streptococcus urinalis: NCTC13766_00872 Help Entry NCTC13766_00872   CDS       T07856                                  Symbol ligA Name (GenBank) DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism surn  Streptococcus urinalis Pathway surn03030   DNA replication surn03410   Base excision repair surn03420   Nucleotide excision repair surn03430   Mismatch repair Brite KEGG Orthology (KO) [BR:surn00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     NCTC13766_00872 (ligA)    03410 Base excision repair     NCTC13766_00872 (ligA)    03420 Nucleotide excision repair     NCTC13766_00872 (ligA)    03430 Mismatch repair     NCTC13766_00872 (ligA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:surn03032]     NCTC13766_00872 (ligA)    03400 DNA repair and recombination proteins [BR:surn03400]     NCTC13766_00872 (ligA) Enzymes [BR:surn01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      NCTC13766_00872 (ligA) DNA replication proteins [BR:surn03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      NCTC13766_00872 (ligA) DNA repair and recombination proteins [BR:surn03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      NCTC13766_00872 (ligA)    NER (nucleotide excision repair)     GGR (global genome repair) factors      NCTC13766_00872 (ligA)    MMR (mismatch excision repair)     DNA ligase      NCTC13766_00872 (ligA)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       NCTC13766_00872 (ligA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH 5_3_exonuc UPF0758_N RNA_ligase RNA_lig_T4_1 Motif Other DBs NCBI-ProteinID:  VEF31778 Position 1:813124..815070 Genome browser AA seq 648 aa AA seqDB search MRELTDLLNQYRQEYYTNDAPSVSDSEYDRLYRELVELEEKYPELIADNSPTQQVGDKVL DGFEKYQHQYQLYSLQDAFSKEELLNFDRRVKNEFPNANYIAELKIDGLSISLHYEKGKL VAGATRGDGQIGENITENLKKIKDIPSTLSQPIDITIRGEAYLPRASFQKINQERQESGQ VEFANPRNAAAGTLRQLDTGIVAKRNLATFLYQVASPVTWGSQSQVLEKASDLGFSVNPV RIEADSIETIWEFIETMQEKRDSLAYDIDGIVIKVNDLAMQDELGFTIKAPRWAIAYKFP AEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTKVSRATLHNVDYINEKDIRLHDVVI VYKAGDIIPAVLRVVDSKRTHQKPMEIPRLCPSCQSELIHFEDEVALRCINPLCPNLRQR SLEHFASRNAMNIAGMGPSIVEKLFKAKLITDVSDIYRLTLEDLLTLEGIKEKSAQKLIN AINNSKANTAEKLLFGLGIRHVGAKVSKQLLEVFGNLHQLIEADEESIAQIDGIGLVVAK SLHSYFERQGAKILLEELTEVGLNLNYLGKIAAKDAALFGTTVVLTGKLEKMTRNEAKEK LEALGAKVTGSVSKKTDLVVAGSDAGSKLTKAESLGIRVEDEDWLLNQ NT seq 1947 nt NT seq  +upstreamnt  +downstreamnt atgagagaattaactgatctcttgaatcagtaccgccaagaatactataccaatgatgca ccaagtgtctcagatagtgagtatgatagactctatcgagagcttgttgagcttgaagaa aaatacccagagctaattgcggataacagtcccacacagcaagttggagataaggtttta gatggctttgaaaaatatcaacatcagtatcaactttatagtttacaggatgctttttca aaagaagaattacttaactttgatcgaagagtcaaaaatgaatttcccaatgccaactat attgctgagctaaaaattgatggactatcaatttctttgcactatgaaaaaggtaaactt gtagctggtgcaactcgcggtgatggtcaaattggtgaaaatattactgagaatttaaag aaaataaaagatattccatcaacattaagtcaaccaatcgatattacaattcgtggcgag gcctatttaccacgtgcatcttttcaaaaaataaatcaagaaagacaagaaagcggacaa gttgaatttgccaatccaaggaatgctgcagctggaaccttgagacagcttgatactgga attgtcgcaaaacgtaatctagcaacgtttttatatcaagtggctagtccagtcacatgg ggaagtcagtctcaagtgcttgaaaaggctagtgatttaggtttttcagtaaatcctgta cgtatcgaagctgactcaattgagacaatttgggaatttattgaaactatgcaagaaaaa agagacagcttagcttatgatattgatggtattgttatcaaagtcaatgatttagccatg caagacgaacttggttttactataaaagcaccaagatgggctattgcttacaagtttcca gcagaagaaaaagaagctgaaattttatctgttgactggactgttggtcgaacaggcgtt gttacaccaactgctaatttaacaccagtccaattagctggaactaaagtcagtcgagca acacttcataatgtcgattatattaatgaaaaagatattagattacatgatgtcgttatt gtttataaggctggagacattattcctgcagtgttaagagttgtagatagtaagagaacc catcaaaaaccaatggaaataccacgattgtgtccatcttgtcagagtgaattaattcat tttgaagatgaagtcgctttgcgttgtattaatccattatgtcctaaccttagacaaaga agtttagagcattttgctagtagaaatgctatgaacatcgctggtatgggaccttcaata gtcgaaaaattgtttaaagctaaattgattacagatgtttctgatatctatcgcctaact ctggaagatttattaactttagaaggcatcaaagaaaagtctgctcagaagttaataaat gctattaataattcaaaagcaaatactgctgaaaaattattatttggattgggtattaga catgtaggtgcaaaggttagtaagcaattattagaagtttttggtaatttacaccaattg attgaagctgatgaagaatctatagcgcaaattgatggtattggactggtagttgcaaag tcacttcatagttattttgagcgacaaggtgcaaaaatattacttgaagaattaactgaa gtaggtttaaatttaaattatttaggaaaaattgctgctaaagatgctgctttatttgga acgacagttgtgttaactggaaaattagaaaaaatgacacgtaatgaagcaaaagagaaa cttgaagctttaggtgccaaagtaacgggatcagtctctaaaaaaacagatttggttgtt gctggtagtgatgctggttctaagctaacaaaagcagaatcattagggataagagttgaa gatgaagactggcttttaaaccagtaa

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