KEGG   Solanum verrucosum: 125808034
Entry
125808034         CDS       T11474                                 
Name
(RefSeq) AP-2 complex subunit alpha-1-like
  KO
K11824  AP-2 complex subunit alpha
Organism
sver  Solanum verrucosum
Pathway
sver04142  Lysosome biogenesis
sver04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sver00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125808034
   04142 Lysosome biogenesis
    125808034
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sver04131]
    125808034
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sver04147]
    125808034
Membrane trafficking [BR:sver04131]
 Endocytosis
  Clathrin-mediated endocytosis
   AP-2 complex
    125808034
Exosome [BR:sver04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   125808034
SSDB
Motif
Pfam: Adaptin_N Alpha_adaptin_C Alpha_adaptinC2 Cnd1
Other DBs
NCBI-GeneID: 125808034
NCBI-ProteinID: XP_049343768
Position
Unknown
AA seq 1012 aa
MALSGMRGLSVFISDVRNCQNKEQERLRVDKELGNVRTRFKNEKGLTPYEKKKYVWKMLY
IYMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLRLAINTVRNDIIGRN
ETFQCLALTLVGNIGGREFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDVVN
VDGWSDRMAQLLDERDFGVLTSSMSLLVALVASNHEAYWSCLPKCVKVLERLARNQDIPQ
EYTYYGIPSPWLQVKTMRSLQYFPTIEDPSTRRSLFEVLQRILMGTDVVKNVNKNNASHA
VLFEALALVMHLDAEKEMMSQCVALLGKFIAVREPNIRYLGLENMTRMLMVTDVQDIIKR
HQAQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFVMREELSLKIA
ILAEKFAPDLSWYVDVILQLIDKAGDFVSDDIWFRVVQFVTNNEDLQPYAALKSREYLDK
PAIHETMVKVSSYILGEYSHLLARRPGCSPKEIFSLIHEKLPTVSTSTIPILLSTYAKIL
MHTQPPDPELQNQILAIFRKYESCIDAEIQQRAVEYLELSKKGAALMDVLAEMPKFPERQ
SSLIKKAEDTEADTAEQSAIRLRTQQQTSNALAVTDQPSANGTLPVSHLGLVKVPSMANT
DRNLADQGETEPDGTLTVVDPQPPSVPSPDVLGDLLGPLAIEGPQPAHNLSSGVGIAPNA
EDALALAPIEEQTATVQPIGNIAERFQALVLKDSGILYEDPYIQIGTKAEWRAHHGRLIL
FLGNKNTAPLVSVQALILPLSHLRIELSLVPETIPPRAQVQCPLEVVNLRPSRDVAVLDF
SYNFGVQLVNVKLRLPAILNKFLQPITVSAEEFFPQWRSLSGPPLKLQEVVRGVRPMSLL
EMTNLLNSLRLMVCPGLDPNANNLVASTTFYSDSTRAMLCLVRIETDPADRTQLRMTVAS
GDPTLTLELKEFIKEQLIIIPTAPTAAAPPVPQPTSPPPPVSDPGALLAGLL
NT seq 3039 nt   +upstreamnt  +downstreamnt
atggcgttatccggcatgagaggtttgtcagttttcatcagcgatgttcgtaattgccag
aacaaagaacaggaacgtcttcgtgtagataaagagcttggcaatgttcgtactcgcttc
aaaaacgaaaaggggctgacaccttatgagaagaagaaatatgtctggaaaatgctttac
atttatatgcttggttatgatgtggattttggtcacatggaagctgtatctctgatatct
gctccaaagtatcccgagaagcaggttgggtacatagtgacatcatgtttgctcaatgag
aaccatgattttttgagattagcaattaatacagtacgcaatgacataataggtcgcaac
gaaactttccagtgtctagcattgactttggttggaaatattgggggaagggaatttgct
gaatctctggcacctgatgttcagaagttactcatatcaagtagttgtaggccacttgtg
aggaagaaggctgccctatgtctcctgcgtctttttaggaaaaatcctgatgttgtgaat
gttgatggctggtcagataggatggcacaactactagatgaacgggattttggtgtcttg
acatcttccatgagccttctagttgcattagtggctagtaaccatgaagcatattggagt
tgtcttccaaaatgtgttaaagtgttggaaaggcttgccaggaaccaagatattccacaa
gaatacacttactatgggataccgtctccctggcttcaggtgaagactatgaggtctctt
caatatttcccgactattgaagatccaagcactagaagatcattgtttgaggttttacaa
cggatattgatgggaactgatgtggtgaaaaatgtgaacaaaaataatgcgtcacatgca
gtcctatttgaagcccttgctcttgtcatgcatcttgatgccgaaaaggaaatgatgtct
cagtgtgttgcattgcttgggaaattcattgctgtccgcgaacctaatattcgttatctt
ggcttggagaatatgactcggatgttgatggttacagatgtacaggacattataaaacga
catcaagctcaaattattacctcactgaaggaccctgatatcagcattaggagacgtgcc
cttgatttactttatggaatgtgtgatgtttctaatgcaaaggacatagtagaagaatta
ttacagtatctcagtacagcggagttcgtgatgcgtgaagaactgtcacttaaaatagca
attcttgcagagaagtttgctcctgatctgtcatggtatgtcgatgtcatccttcaatta
attgacaaggccggcgattttgtcagtgatgacatttggttccgtgttgtgcagtttgtt
acaaacaatgaagatcttcagccttatgcagctttgaaatccagagaatatcttgataag
cctgccattcatgaaacaatggtcaaggtaagttcatatatccttggagaatacagccat
cttcttgccagaaggccaggatgtagtccaaaggaaatcttcagcctcattcatgagaag
cttcctactgtttcgacttcaacaattcctattcttctttcgacatatgcaaaaattttg
atgcacacacaaccaccagatccggagctacagaatcagatattggcaatattcagaaaa
tatgagagttgcatcgatgctgaaatacagcaacgagctgtggaatacttagagttgagt
aagaaaggggcagctttaatggatgtcttagctgaaatgcctaagttccctgagcgacag
tcctcattaattaaaaaggctgaagatactgaggccgatactgctgaacaaagcgcaatc
aggctgcgtacacagcagcagacctctaatgctctagcagtaacagatcaaccctctgct
aatggtactctgccagtcagtcaccttggtttagtgaaggttccaagcatggccaacacg
gatcgtaacttagcagatcaaggggagactgagccagatggaactttgactgttgtggat
cctcaacctccttcagtaccttcacctgatgtcctgggagatcttttaggtccattggct
attgaaggtcctcaacctgcccataacttgagttccggtgtcggcattgctccaaatgca
gaggatgcgctagcacttgcacctattgaagaacagactgcaacagtccagccaatagga
aatattgcagaaaggtttcaagccttggtcctcaaagacagtggtatactgtatgaggat
ccttatattcagattggcacaaaagcagagtggcgagcacatcatggacgactgatcctc
ttcttgggaaacaagaatacggctccgcttgtttcagttcaggctctgatactgccccta
tctcatctgagaatagaactgtcattagtacccgagacaattcctcctcgtgcacaggtt
caatgtcctcttgaagtagtcaacctccgtccaagtagggatgtggcggttcttgacttc
tcatataattttggggtgcagttggtcaatgttaaacttcgactccctgccatcttgaat
aagtttcttcagcctattacagtatctgccgaagagtttttcccgcagtggagatcacta
tctgggccgccactgaagctccaagaagtggttagaggtgtaagaccaatgtcacttctg
gaaatgacaaacctgctcaacagtttacgcctgatggtttgtccagggcttgatccaaat
gcaaataatttggttgctagcacaactttctactctgacagtacacgtgccatgttgtgt
ttggtaagaatagaaacagatccagctgatagaactcaactgcgtatgacagttgcttct
ggagatcctactctgacactcgagttgaaggagttcattaaggaacaattgattattatc
cctactgctcccacggctgctgcaccaccagttcctcagccaacctctccacctccacca
gtatcagaccctggggcactgcttgctggtttgctttaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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