KEGG   Setaria viridis (green foxtail): 117839494
Entry
117839494         CDS       T07951                                 
Name
(RefSeq) nuclear poly(A) polymerase 3 isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
svs  Setaria viridis (green foxtail)
Pathway
svs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:svs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117839494
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svs03019]
    117839494
Enzymes [BR:svs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     117839494
Messenger RNA biogenesis [BR:svs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     117839494
SSDB
Motif
Pfam: PAP_NTPase PAP_central NTP_transf_2 PAP_RNA-bind MTPAP-like_central Polbeta
Other DBs
NCBI-GeneID: 117839494
NCBI-ProteinID: XP_034575723
Position
9:45829644..45835449
AA seq 535 aa
MALDLAVAGSAARKAEVQTLAPVLLMGPPPPPPIPPTSGMYLPGPPPPGVLLPRPIPMPL
TREVMVHMDECRSRSLLKFISDAAIVPSLEDEQRRERVVHELGKIVMDWAKRVAYEQGKQ
HWITSAAVLTFGSYALGAYGPESDIDVLCVGPYIASLQHHFFVVLRHMLEGRPEVSELHS
IEGAKVPLMRFKFNGILVDFPYVQLPVINAAEAIHAFDPRVLENVDGASWKCLSGVRVNR
QIIQLVPNMKKFQYLLRCLKLWARKRGLHCHLLGFFAGIHLAILAAYVCRRHPNASINSL
LSLFFEIFVHWPWPLPVSLLEPPALCRGADGCSLMPIMLPCIPQEFCSSSTTESTFSKIK
EELRRGYALTKDTRTTDFDWSWLFAPFPYGARYKCFLRIVLSAPMAEELRDWVGWVKSRF
RNLILKLESLGVFCDPDPSEQVDHTINEPNVVFFWGLMYRRSIQICSSSLKEDFMKSVFN
NIYGKEKCAHSDITMSIVGPPQLPKSVFDHSVYSEKLPPHMMAHQLMKQSYNAVS
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggcgctcgacctcgccgtcgcgggctcggcggcccgcaaggccgaggtccaaacccta
gcacccgtgctgcttatgggcccgccgcctccaccgccgatcccgccgacgtcggggatg
tacctcccgggccccccgcccccgggggtgctcctgccgcgcccgatccccatgccgctc
actcgcgaggtcatggtgcacatggacgagtgccggagccgctccctcctcaagttcatt
tccgacgcggcgattgtgccttcgctggaggacgagcagaggagggagcgggtggtacac
gaactcggcaagatagtgatggattgggcaaagagggtggcgtacgagcaggggaaacag
cactggataacatcagctgcggtgttgacctttggctcctatgccttgggggcatatgga
cctgaatctgatatagatgttctctgtgtcggcccctatattgcatcactgcaacatcat
ttttttgttgtcctgcgacacatgcttgaagggaggccagaagtatcagaattgcattca
atcgaaggagctaaggttccattgatgcgttttaaattcaacggaattttagtcgatttt
ccttatgtccaactcccagtgatcaatgctgcagaggctattcatgcatttgatccccgt
gtgctagagaatgttgatggggcaagctggaaatgtctatctggagttcgtgttaataga
caaatcattcaattggttcctaatatgaagaagtttcaatatctgctgcggtgtcttaaa
ctatgggcaagaaaaagaggacttcattgccatctacttggattcttcgctggaatccat
ttggcgattcttgctgcatatgtttgtcgcagacatccaaatgctagtataaatagtctg
ctgtctttgttctttgaaatttttgttcattggccttggcctctcccagtgagtttgctt
gaaccgccagctctttgtcggggtgctgatgggtgctctctcatgcccataatgttgccc
tgtattccacaagaattttgctcctctagtacgacagaaagtactttcagcaaaatcaaa
gaagaacttcggcgtggttatgctttgaccaaggataccagaactactgattttgactgg
agttggctctttgcaccgtttccatatggtgcaagatacaaatgctttctccgcatagtt
ctctctgctccgatggctgaagaattacgtgactgggttggatgggtgaaatcacgattc
cgcaaccttattctcaagctggagagtcttggtgttttctgcgacccagatccatcggag
caagttgatcataccatcaatgagccaaatgttgtattcttctggggtctcatgtacaga
aggagtattcaaatatgctcaagttctctcaaagaagacttcatgaaaagtgtatttaat
aacatctatggaaaggaaaaatgtgcccattcagatatcacaatgtccattgttgggcct
ccccagctgcctaaaagtgttttcgatcactcagtttactcagagaagctgccaccacat
atgatggcgcaccaactaatgaagcagagctacaatgcagtcagctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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