KEGG   Sciurus vulgaris (Eurasian red squirrel): 306650151
Entry
306650151         CDS       T11892                                 
Symbol
PAPOLB, ACX6B4_012583
Name
(RefSeq) poly(A) polymerase beta
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:svul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    306650151 (PAPOLB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svul03019]
    306650151 (PAPOLB)
Enzymes [BR:svul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     306650151 (PAPOLB)
Messenger RNA biogenesis [BR:svul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     306650151 (PAPOLB)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central Polbeta
Other DBs
NCBI-GeneID: 306650151
NCBI-ProteinID: XP_078978089
Position
18:28415386..28418261
AA seq 635 aa
MPFPAAGPGAPLAPPQPCGISSAISLAAPRDTDHELTHKLVETLKPFGVFEEEEELRRRI
LILEKLNNLVKEWIREISESKSLPQAVTESVGGKIFTFGSYRLGVHTKGADIDALCVAPR
HVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDL
DLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSNILG
FLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPVWDP
RVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLNKAEWSKLF
EAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFP
APKENPDKEEFRTMWVIGLVLKKPENSETLSIDLTYDIQSFTDTVYRQAINSKMFEMDMK
IAAMHLRRKELHQLLPNHILQKKKTPSAEGIRLTAVNDSSLHLTVDDENSMSVPLPMGAT
KTGPLTGNPQERSSPGLAIMAASVTNIQTPEVPLQHMNPNESPGVALSDNIPPAPSQPTI
SPPPKPTVTRVVSSTHLVNIHPDLQEMQQQIYPIL
NT seq 1908 nt   +upstreamnt  +downstreamnt
atgccgtttcccgcggcgggcccgggagcgccgctggcgccgccgcaaccctgtggcatc
tcctcggcgatcagcctggccgcccccagggacacggaccacgagctcacgcataagctg
gtggagaccctgaagcccttcggggtgttcgaggaggaagaggagctgcggcgcaggatt
ctaattttggaaaagttgaacaacttggtgaaggagtggatacgcgagatcagtgaaagc
aagagtcttccgcaagccgtgacggaaagtgtcgggggtaaaatcttcacgttcggctcg
taccgcctgggcgtgcacacgaagggagctgacatcgacgcgctgtgcgtcgcgcccagg
cacgtcgaccgaagcgactttttcacctcattctacgataaattgaaactacaggaagaa
gtaaaagacttaagggctgttgaggaggcatttgtgccagtgatcaaactctgttttgat
gggatagagatagatatattgtttgcaagattagcattgcagactattccagaagatttg
gacctaagagatgacagcctgcttaaaaatttagatattagatgcataagaagcctaaat
ggctgccgggtaactgatgaaattttacatctagtaccaaacattgacaacttcaggcta
actctgagagccatcaaattatgggccaaatgccacaatatctattccaatattttaggt
ttccttggaggtgtttcctgggctatgctagtagcaagaacctgccagctttatccaaat
gcaatagcatcaactcttgtccgaaaattttttttggtgttttctgaatgggaatggcca
aatccagtgttactaaaagagcctgaagaacgaaaccttaatttacctgtgtgggaccca
agagtaaatcccagtgataggtaccatcttatgcctataatcacaccagcatacccacag
cagaactccacttacaatgtttcagtttcaaccaggatggtcatgattgaggagtttaag
caagggcttgctatcacacatgaaattttgctgaataaggcagagtggtccaaacttttt
gaagctccaagcttctttcaaaagtacaaacattatattgtacttctggcaagcgcacca
acagaaaaacaacatctagaatgggtgggcttggtggaatcaaagatccgaattctagtt
gggagcttggagaagaacgaatttattacactggcacatgtgaacccccagtcatttcca
gcgcccaaagaaaatcctgacaaggaagaatttcgtacaatgtgggtgattgggttagtg
ttaaaaaagccagaaaattcagaaactctcagtattgatctcacctatgatattcagtct
ttcacagatacagtttataggcaagccataaatagtaagatgtttgagatggatatgaaa
attgctgcaatgcatttaagaagaaaggaacttcatcaactacttcctaatcacattctt
cagaaaaagaaaacaccttcggcagaaggtataagattgacagctgtgaatgacagcagc
ctccacttgactgtagatgatgaaaacagcatgtctgtgcctttacctatgggtgccaca
aagactggcccattgactggcaaccctcaggaaagaagcagtcctggcctggctataatg
gcagcatctgtgaccaacatacagactcctgaagttcccttgcaacacatgaatcccaat
gaaagcccaggggttgcattgagtgacaatattcctccagctccctcacagcctaccatt
tctccaccaccaaagcccacagtcaccagagttgtttcttcaacacatctggtaaatatc
cacccagaccttcaggaaatgcagcaacaaatatacccaatcctatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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