KEGG   Sciurus vulgaris (Eurasian red squirrel): 306654921
Entry
306654921         CDS       T11892                                 
Symbol
PAPOLA, ACX6B4_017353
Name
(RefSeq) poly(A) polymerase alpha isoform 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
svul  Sciurus vulgaris (Eurasian red squirrel)
Pathway
svul03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:svul00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    306654921 (PAPOLA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:svul03019]
    306654921 (PAPOLA)
Enzymes [BR:svul01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     306654921 (PAPOLA)
Messenger RNA biogenesis [BR:svul03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     306654921 (PAPOLA)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central RMD6 Polbeta
Other DBs
NCBI-GeneID: 306654921
NCBI-ProteinID: XP_078985081
Position
2:complement(10035761..10095860)
AA seq 739 aa
MPFPVTTQGSQQTQPPQKHYGITSPISLAAPKETDCILTQKLIETLKPFGVFEEEEELQR
RILILGKLNNLVKEWIREISESKNLPQSVIENVGGKIFTFGSYRLGVHTKGADIDALCVA
PRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIPE
DLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNI
LGFLGGVSWAMLVARTCQLYPNAIASTLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVW
DPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSK
LFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGLVESKIRILVGSLEKNEFITLAHVNPQS
FPAPKENPDKEEFRTMWVIGLVFKKTENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVD
MKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTS
AMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQATEVSTPQVNSSESSGGTSSESIPQTAT
QPAISPPPKPTVSRVVSSIRLVNPPPRPSGNVTTKIPNPIVGVKRTSSPHKEESPKKTKT
EEDETSEDANCLALSGHDKTETKEQLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPA
LPANPIPVIKNSIKLRLNR
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgccgtttccagttacaacgcagggatcacaacaaacacagccgccacagaagcactat
ggcattacttctcctatcagcttagcagcccccaaggagactgactgcatacttacacag
aaactaattgagactctgaagccctttggggtttttgaagaggaagaggagctgcagcgc
aggattttaattctgggaaaattaaataacttggtgaaagagtggatacgagaaatcagt
gaaagtaagaatcttccacaatctgtaattgaaaatgttggaggaaaaatttttacattt
ggatcttacagattaggagtacatacaaaaggtgctgatattgatgcattgtgtgttgca
ccaagacatgttgatcgaagtgactttttcacctcattctatgataaattgaaattacaa
gaagaagttaaagatttaagagctgttgaagaggcatttgtaccagttatcaaactctgt
tttgatgggatagagattgatattttgtttgcaagattagcactgcagactattccagaa
gatttggacctacgagatgacagtctgcttaaaaatttagatataagatgcataagaagt
cttaatggttgcagggtaaccgatgaaattttacatctagtaccaaacattgacaacttc
aggttaacactgagagctatcaaactgtgggccaaacgccacaacatctattccaatata
ttaggtttcctcggtggtgtttcctgggctatgctagtagcaagaacttgccagctttat
ccaaatgcaatagcatcaactcttgtacataaatttttcttggtattttctaaatgggaa
tggccaaatccagtgctattgaaacagcctgaagaatgcaatcttaatttgcctgtatgg
gacccaagggtaaaccccagtgataggtaccatcttatgcctataattacaccagcatac
ccacagcagaactccacgtacaatgtgtccgtttcaacacggatggtcatggttgaggag
tttaaacaaggtcttgctatcacagatgaaattttgctgagtaaggcagaatggtccaaa
ctttttgaagctccaaacttctttcaaaagtacaagcattatattgtacttctagcaagt
gcaccaacggaaaaacagcgcctagaatgggtgggcttggtggaatcaaaaattcgaatc
ttggttggaagtttggagaagaatgaatttattacactggctcatgtgaatccccagtca
tttccagcacccaaagaaaatcctgacaaggaagaatttcgcacgatgtgggtgattggg
ttagtgtttaaaaaaacagaaaactctgaaaatctcagtgttgatcttacctatgacatt
cagtctttcacagatacagtttataggcaagcaataaacagcaagatgtttgaggtggat
atgaaaattgctgcaatgcatgtaaaaagaaagcaactccatcaactactacctaatcat
gtgcttcagaaaaagaaaaagcattcaacagaaggagtcaaattaacagctctgaatgac
agcagccttgacttgtctatggacagtgataacagcatgtctgtgccttcacctactagt
gctatgaagaccagtccattgaacagttctggcagctctcagggcagaaacagtcctgct
ccagctgtgacggcagcatctgtgaccaacatacaggctactgaagtttctacaccacaa
gtaaattccagtgaaagctcagggggtacatcgagtgaaagcattcctcaaactgccaca
caaccagccatttctccaccaccaaagcctacggtctccagagttgtttcctcaatacgt
ctggtaaacccaccacctagaccttcaggaaatgtaacaacaaaaatacctaaccctata
gtaggagtcaagaggacgtcatcacctcataaagaagagagtcccaagaaaaccaaaaca
gaagaggatgaaacaagcgaagatgctaactgtcttgctttgagtggacatgataaaaca
gaaacaaaggaacaacttgatacagagacaagtacaactcaatcagaaactattcagaca
gcggcttctctgttggcctctcagaaaacatccagtacagacctttctgatatccctgct
ctccctgcaaatcctattcctgttatcaagaattcaataaaactgagattgaatcggtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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