KEGG T06566: A1Q1

Trichosporon asahii var. asahii: A1Q1_02192

Entry

A1Q1_02192        CDS       T06566

Name

(RefSeq) spliceosome-related protein

K13100

pre-mRNA-splicing factor CWC22

Organism

tasa Trichosporon asahii var. asahii

Brite

KEGG Orthology (KO) [BR:tasa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tasa03041]
    A1Q1_02192
Spliceosome [BR:tasa03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    A1Q1_02192
Complex C
   U4/U6.U5 tri-SnRNP related factors
    A1Q1_02192

SSDB

Motif

Pfam:

Memo MA3 MIF4G HEAT_5MP1_2 rva_4

Other DBs

NCBI-GeneID:

25985706

NCBI-ProteinID:

XP_014180612

UniProt:

J6F0T3

Position

Unknown

AA seq 1139 aa
MPRSTSRSPSVDSRSPSPETSKRKRSPSASPRARSPSPPARRRRDRSPDEEPPRRSEVKD
AGENGNGTVAAPSADARAEFARLLGSRSGGAYIPPARLRAMQEQASKDKTSPEYQRMSWD
ALRKSINGMINKVNITNIKHVVPELFGENLIRGKGLFARSVMRAQAASLPFTPIFAALVA
IVNTKLPQVGELVLTRLIAQFRRAYKRNDKNVCNATSTFIAHLVNQYVAHEIVALQILLL
CLERPTDDSVEVAVSFMREVGLFLSENSPRANTMVFERFRAVLHEGAISKRCQYMIEVLF
QVRKDKYKDNPMIPEGLDLVEEEEQITHRISLDDELKVQEGLNLFKVDPNFLENEERYNE
IKREILGDSDDEDSGSGSDYDSDSESEDDVAPEKEGITDMTETNLINLRRTIYLTIMNSL
NFEEAVHKLLKVNIPEGREVELVNMIIECCSQERTYKAFFGSIGERFAKLNRIWTDLFQD
AFQRYYDTIHRYETNKLRNIARFFGHMLASDAISWAVLHVVHMNEEETTSSSRIFVKIAF
TEVKEELGLKKLVERLKFPDLQPAFAGMFPTDNPRNTRFSINYFTQIGLGAVTEDMREWL
QNAPKLLAEQRAAAQDSSDSDSSSVLSSSESDLSSSDYSSDDSRYRRRRRYSSDSRSPPR
RRRYSSDDSRSPSPRRRRYSSDDSRSPSPRRRRYSSDDSRSPPPRRRYSDASDRSPPRRR
RYSDSLTPSPDRRRKDSTPPRRRDDSPPRRRDSVTPPRRRRDSPSPRRRDDSPPPRRRND
SPPPRRRDDSPPHRRRYDDDTPPRRRSPWLADHAGAPQVGCIRFMCAFPLSALPAALSSL
HPLSAITTSMSGVREASHAGSWYTNNSSRLTAELSGYLDKVHPLNNPPFSPPVKEAKAII
APHAGFSYSGPAAAWAYAAVPVDKIKRVVLLGPSHHVYLSGIALSKFASYGTPIGDIPLD
LEAIADLRKSRLFSDMKSSVDEDEHSLEMHLPYIRQVFGKRDIKLVPLLVGHPSEDKRKA
ISAALSKYWNDDETFFIISSDFCHWGSRFSCTPYYPHAPDPPNPVPPVPANSTPQNTPTP
ELVKRYAGQSSGDVPIWKSIQYMDHEGMDLLRSPARDGAVEEWESYLARTKASNKHPSQ

NT seq 3420 nt +upstreamnt +downstreamnt
atgccccgctcaacatctcgctccccgagtgtcgactcgcgcagcccgtcgccggagacg
tcgaagcgcaagaggtccccctcggcttctcctcgagcccggtcgccctctcctcccgcg
aggcgtcgcagggatcgatcgcccgatgaagagccaccgcgtcgcagtgaggtcaaggat
gcaggcgagaacggaaacggcactgtggctgcgccgagcgccgatgctcgcgccgagttc
gcgcgcctccttggctcccgctcaggaggcgcgtatatccctcccgctcgcctgagggcg
atgcaggagcaagcgagcaaggacaagacgagtcccgagtaccagcgcatgtcgtgggat
gccctccgcaagagcatcaacggtatgatcaacaaggtcaacatcaccaacatcaagcac
gttgtgccggagctgttcggcgagaatctgatccgcggtaagggcctgtttgcgcgcagt
gtgatgcgtgcgcaggccgcttctctgccgtttacgcctatctttgctgctctcgtggcc
atcgtgaacacgaagctgccccaagtcggcgagcttgtcctcacccgtcttatcgcccag
ttccgccgtgcgtacaagcgcaacgacaagaatgtgtgcaacgccacgtcaactttcatt
gcgcacctcgtgaaccaatatgtcgcccacgagattgttgcgctccagatcctcctcctc
tgcctcgaacgcccgacggacgattcggtcgaagtcgcggtcagcttcatgcgcgaggtt
ggtcttttcctgtccgagaactcgccgcgggccaacaccatggtgttcgagcgtttccgc
gctgttctccacgagggtgccatttcaaagcgctgccagtacatgatcgaggtgctcttc
caggttcgcaaggacaagtacaaggacaacccgatgatccccgagggtctcgacctggtg
gaagaagaggaacagatcacgcacaggatctcactcgacgacgagttgaaggttcaggag
ggtctcaatctgttcaaggtggaccctaacttcttggagaacgaggagcgttacaacgag
atcaagcgagagattctcggcgattccgacgacgaggattcaggcagcggaagcgattac
gattctgattctgagtcggaggacgacgtcgcacccgaaaaggagggtattaccgacatg
acggagaccaatctcatcaacttgcgacggacgatctacctcacaatcatgaactccctc
aacttcgaggaggccgtccacaagctgctcaaggtcaacattccagagggtcgcgaagtc
gagctcgtcaacatgatcattgagtgttgctcgcaggagcgtacctacaaggcgttcttc
ggctctatcggcgagcgcttcgcgaagctgaaccgcatttggaccgatttattccaggac
gcctttcagcgatactacgacaccattcaccgatacgagacgaacaagctccgaaacatt
gcccgcttctttggtcacatgctggcgtcggacgctatttcctgggctgttctgcacgtt
gttcatatgaatgaggaggagacgacgtcgtcttcgcgtatcttcgtcaagattgccttc
accgaggtcaaggaggagctgggtctgaagaagctggtcgagcgcctgaagttcccggac
ctgcagccggcctttgcgggcatgttcccgaccgacaacccccgaaacactcgtttctcg
atcaactatttcacgcagatcggcctcggtgctgttacggaagatatgcgcgagtggctg
caaaatgctccgaagctgctggctgagcagagagctgccgcccaggacagctcagacagc
gattcgtcgtctgtgctgtcgagctcggaaagtgacctttctagctccgactactcgtcc
gacgactcgcggtaccgccgccgtcggcgttactcgagtgactcgcgatctccgccacgc
cgcaggcgctatagctccgatgactcgcggtcgccttctccgcgccgtaggcggtatagt
tcggacgactctcgttcgccatctccgcgccgtaggcgatacagctcggatgactcgcga
tctccccctcctcgccgacgctattcggatgcttctgatcgctcgcctcctcgccggagg
cgttactctgactctctgacgccgagtcccgaccgtcgtcgtaaggactcgactcctccc
cgccgccgcgacgacagcccccctcgccgtcgggatagcgtaacccctcctcgacgacga
cgtgacagcccgtctccgcgccgccgcgatgacagtcctccccctcgccgtcgtaatgac
agcccccctccgcgccgtcgcgatgactcccctccccaccgtagaagatatgacgatgac
acgcctcccaggcgccggtcaccttggcttgccgatcacgctggtgccccacaggtcggt
tgcatccgcttcatgtgtgcgttcccactatcagccctgccagccgcactttcatcattg
catcctctctcagctatcacgacgagcatgtcgggagtacgcgaagcctcacacgctggg
agctggtacacgaacaacagctctcgactcaccgccgagctgtcgggctacctcgacaag
gtgcatccgctgaacaaccctccgttcagtccccccgtgaaagaggcaaaggccatcatc
gccccgcatgccggcttctcctattccgggccggcggcagcgtgggcctacgcggctgtg
cctgtcgacaagatcaagcgcgttgtgctccttggacctagtcaccatgtctacctctcc
ggcattgcgctcagcaagttcgcatcctatgggacgcccattggagatatccccctggat
ctggaagccatcgccgatctccgcaagtcacgcctattctcggacatgaagagcagcgtc
gacgaggatgagcactcgctcgagatgcacctcccttacatccgccaggtcttcggcaag
cgggacatcaagcttgtgcctctcctcgtcggtcatcctagcgaagacaagcggaaggcc
atatccgccgccctctccaagtactggaatgacgacgaaacgttcttcatcatttcctcg
gacttctgtcactggggatcgcgcttctcatgcactccctactatccacacgcccccgat
ccacctaaccccgtgcctcccgtcccagcgaactctacccctcagaacacgccgacgcct
gagctcgtcaagagatatgccggtcagagttccggcgacgtgccaatttggaagtcgatc
cagtacatggatcatgaaggaatggatctccttcgctctcctgccagagacggcgcagtc
gaggagtgggaatcgtatctagcgcgcacaaaggcgagtaacaaacatccttcacagtga

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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