KEGG   Trematomus bernacchii (emerald rockcod): 117469019
Entry
117469019         CDS       T09643                                 
Name
(RefSeq) poly(A) polymerase type 3-like
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tben00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    117469019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tben03019]
    117469019
Enzymes [BR:tben01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     117469019
Messenger RNA biogenesis [BR:tben03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     117469019
SSDB
Motif
Pfam: PAP_NTPase PAP_central NTP_transf_2 MTPAP-like_central Nrap_D2 TUTase
Other DBs
NCBI-GeneID: 117469019
NCBI-ProteinID: XP_033969306
Position
Unknown
AA seq 379 aa
MPRRTRRTAPSRPKQKVYGPPPPTREEECAQENDLIEILKSFGCFESDVELRHRENVVQR
LESLFKEWLIEMCLQMNLPGIVPQKVGGKLVPFGSHHLGVASKGADIDVLCVGPGFLQRK
DFFSSFVRKLKRQREVKDIRVIEEAFVPVVKLTFEGIEIDLVFARVARNRVPQEMDLLRE
DWLQGTDLHSVRSLNGYRVTEEILRLVPNVQNFRLALRTIKLWAKQRNIYSNSLGFLGGV
SWAILVARICQEYPNASASTLVTKFFKEYNMWKWPNPIMLRELKDCHFNLPVWDARVNLA
DRSHSMPIITPAYPMQNTAFNVTPSTLAIMKEEIQRGHTIAGWSQLFEKPNFLRKYKYVI
ICPNMNMCISIRNIYFLKY
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgcctcgacgaacaaggaggacagctccatccagacctaaacaaaaggtgtatgggccc
cccccaccaacacgtgaggaggagtgtgctcaagaaaatgacttgatcgagattctcaag
tcattcggatgctttgagagcgacgtggagctgagacacagagagaatgtggtccagaga
ctggagtcactgttcaaagagtggctcatagagatgtgtctgcaaatgaatttaccaggc
attgtcccgcagaaggttggagggaagctcgtccctttcggctcccatcacctgggggtc
gcctcgaaaggcgccgacatcgacgtcctctgtgtgggaccgggtttcctccagaggaag
gacttcttctcctctttcgttagaaaactgaagaggcagagagaggtcaaagacatacgg
gtcattgaagaggcattcgtccctgtcgttaaactgacctttgaaggaattgagatagac
ttagtctttgccagggtggccaggaacagagtcccacaggaaatggacctgctccgagag
gattggctacaggggacggacctccactctgtgaggagtctgaacggctacagagtaaca
gaggagatcctcaggctcgtgcctaatgttcagaacttcagactcgctctgaggaccata
aagctctgggccaaacaaagaaacatatactcaaactctttaggtttccttggcggtgtt
tcctgggccattctggtagccagaatctgccaggagtacccgaacgcctcagcctccacc
ctggtcacaaagtttttcaaggagtacaacatgtggaagtggccaaaccccatcatgttg
agggagttaaaggattgtcatttcaaccttcctgtgtgggatgcaagggttaatctggca
gaccgctcccactctatgccgatcatcacgccggcatacccaatgcagaacactgctttc
aacgtgactccctccaccttggccatcatgaaggaggagatccagcgtggccacactatc
gccggctggtcccaactctttgagaagcccaatttcctcaggaagtacaagtatgtaata
atctgcccaaatatgaacatgtgtattagcatacgcaacatatactttcttaaatattga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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