KEGG   Trematomus bernacchii (emerald rockcod): 117486728
Entry
117486728         CDS       T09643                                 
Name
(RefSeq) tubulin beta-1 chain-like
  KO
K07375  tubulin beta
Organism
tben  Trematomus bernacchii (emerald rockcod)
Pathway
tben04145  Phagocytosis
tben04517  IgSF CAM signaling
tben04540  Gap junction
tben04814  Motor proteins
tben05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:tben00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    117486728
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    117486728
  09144 Cellular community - eukaryotes
   04540 Gap junction
    117486728
  09142 Cell motility
   04814 Motor proteins
    117486728
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    117486728
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tben03036]
    117486728
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tben04812]
    117486728
   04147 Exosome [BR:tben04147]
    117486728
Chromosome and associated proteins [BR:tben03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     117486728
Cytoskeleton proteins [BR:tben04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    117486728
Exosome [BR:tben04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   117486728
  Exosomal proteins of colorectal cancer cells
   117486728
  Exosomal proteins of bladder cancer cells
   117486728
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 117486728
NCBI-ProteinID: XP_033991143
Position
Unknown
AA seq 445 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGSYCGDSDLQLDRINVYYNEASGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAEGCDCLQGFQLTHSLGGGTGSGMGTLMISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDSKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEDEGEEELA
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgagggaaattgtgcacctccaggcaggccagtgtggaaatcagattggcgctaagttt
tgggaagtcataagcgacgagcatggcatcgacccgactgggtcatactgtggggacagc
gacctgcagttggatcgcatcaacgtgtattacaacgaggcttcaggtggaaagtatgtc
ccccgggcagtgctggtggacttggagcccggcaccatggactcggtgaggtccggtccc
tttggccagatatttagaccagacaactttgtctttggccagagcggagctggtaataac
tgggctaagggtcactacactgagggagccgagctggtggactcggtcctggatgtggtg
aggaaggaggcggagggctgcgactgcctgcagggcttccagctcacacactccctgggt
ggagggaccggttcaggcatgggcacgctgatgatcagcaaaatccgagaggagtatcca
gaccgtatcatgaacactttcagcgtggtgccttcccccaaggtgtcagacacagtggtg
gagccgtacaacgccaccctctccgtccaccagctggtggagaacacagatgagaccttc
tgcattgataatgaggcgctgtatgacatctgcttccgcacactgaagctcaccacgcca
acctacggagacctcaaccacctcgtctcagccaccatgagcggggtgaccacctgtctg
cgcttccccggccagctcaatgctgatctgaggaaactggccgtcaacatggtgcccttc
cccaggctgcacttcttcatgcccggcttcgcccccctgaccagccgaggcagccagcag
tacagggcgttgacggttcctgagctcacccagcagatgttcgactccaagaacatgatg
gcagcgtgtgacccgcgccacggccgctacctcacggtagccgccatcttcagaggccgc
atgtccatgaaggaagtggacgagcagatgttgaatgtgcagaacaagaacagcagctat
tttgttgagtggatcccaaacaacgtgaagactgccgtctgcgacattcctccccgtggc
ctcaagatggccgccaccttcatcggcaacagcacggccatccaggagctgttcaagcga
atctcagagcagttcaccgccatgttccgccgcaaggccttcctccactggtacaccggc
gagggcatggatgagatggagttcacagaggctgagagcaacatgaacgacctggtgtct
gagtaccagcagtaccaggacgccactgctgaggaggagggcgagtttgaagatgaaggc
gaagaggagctggcctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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