KEGG   Theobroma cacao (cacao): 18588007
Entry
18588007          CDS       T02994                                 
Name
(RefSeq) nuclear poly(A) polymerase 4
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18588007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18588007
Enzymes [BR:tcc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     18588007
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     18588007
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 18588007
NCBI-ProteinID: XP_007012182
Position
9:complement(2436433..2442765)
AA seq 817 aa
MDTRSPNGSSPQQSQSLKKYGITKPISLAGPSEADVQRNTELEKFLIESGLYESKEEAVK
REEVLGHINEIVKSWVKQLTRQRGYTDQMVEEANAVIFTFGSYCLGVHGPGADIDTLCIG
PSYVNREEDFFIILHDILAEMEEVTELQPVPDAHVPVMKFKFQGISIDLLYASISLLVVP
DNLDISHGSVLHNVDEQTVRSLNGCRVADQILKLVPNVEHFRMTLRCLKFWAKRRGVYSN
VTGFLGGVNWALLVARVCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEEDELGFPV
WDPRKNPRDRFHHMPIITPAYPCMNSSYNVSISTLRVMMEQFQCGNRICEEIELNKSQWS
ALFEPYLFFEAYKNYLQVDIVSAEADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYP
NEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQEISMYMYWKPGMDIYV
SHVRRRQLPAFVFPDGYKRPRSSRHPGQQTGKICEDITRSQSGSVERQIKRKHEDEALDE
KMDKPDKRSSISPQRLESVSPESSASRSGGTSHISDGQVVTLERPTTWDVDSNSVLRQSS
GLLDSEKRNVGISIQQARTVDQGSLTLSGQTSLDVVHNLSVVRNVESAEQMGEPFLRQES
HSPCEVPDSELRETCKTGVNQEKTGDLGSAYMNDAETGSSRRILNWKGGGVGVDQEVVKP
CNQTAVVEIAESVFGSSSNAQNLNCEGVVCSADLDSLLENGHLNANGVFQNSLSEELKPN
IALGKVVNSQDGARSETLQKPVMRHVFLELLFCLCKL
NT seq 2454 nt   +upstreamnt  +downstreamnt
atggatactcggagccctaacggatcttcgccgcagcaatcacagtctctgaagaaatac
ggaatcacgaaaccgatatccctcgctgggccaagtgaggctgatgttcaacggaatacg
gaattagagaagtttttgatagagtcagggctttacgagagcaaagaagaagctgtgaaa
agagaggaggttctcgggcatatcaatgagattgtaaaaagttgggtaaagcaattaact
cgtcaaaggggctacacggatcagatggtggaggaagcaaatgctgtcattttcactttt
gggtcttactgtttaggggtgcatggacctggggctgacatagacactttgtgtattggg
ccatcttatgtgaaccgagaggaagatttcttcatcattttgcatgatatattggctgaa
atggaagaggtcactgaacttcaaccggttccagatgctcatgtccctgtaatgaaattt
aagtttcaagggatatcaattgatcttctttatgcaagtatatctcttttggttgttcca
gataaccttgatatctcacatgggtctgtgctgcataatgttgatgagcaaactgttcga
agtcttaatgggtgcagggttgctgatcaaatccttaaactcgttccaaatgttgagcac
ttccgcatgacgcttagatgtttgaagttctgggccaaaaggcgtggtgtttattccaat
gttactggattcctaggtggtgtgaattgggcgcttctggttgcacgggtgtgccagctg
tatcccaatgcaatacctagtatgctggtttctcgattttttagagtatatactcagtgg
agatggccaaaccctgttatgttgtgttcaatagaagaggatgaacttggctttcccgtt
tgggatcctcgaaagaatcctcgggaccggtttcatcatatgccaataataactcctgca
tacccttgcatgaattctagttacaatgtctctataagtactcttcgcgtaatgatggaa
cagttccaatgtggtaatagaatatgtgaggagattgagctgaataaatctcaatggagt
gctttgtttgaaccttatcttttctttgaggcatataaaaactatctacaagttgacata
gtttcagcagaagctgatgatttgctggcatggaaaggctgggtggagtcacgacttaga
cagcttaccttgaagatagagcgggacacaaatgggatgttgcagtgccatccttaccca
aatgagtatgtagatacgtccaagcaattcccacattgtgctttcttcatgggcttgcag
aggaaagagggagtgagtggtcaagaaggtcaacaatttgacatacgtgggacagttgat
gagttcagacaggagataagcatgtacatgtattggaaaccaggaatggatatttatgtt
tctcatgttcgtaggaggcagctccctgcctttgttttccctgatggatataaacggcct
cgatcatcgaggcatcctggccagcagactgggaaaatttgtgaagatattacaaggtcc
cagtcagggtctgtagaaagacaaattaagagaaaacatgaagatgaagcattggatgaa
aaaatggacaaaccagataagcggtcctcaattagcccccagcggctggagtctgtttca
cccgaaagtagtgcaagtaggtctggtggaacatctcatattagcgatggtcaagtggtt
acactagagcgcccaacaacttgggatgttgatagcaattctgtgcttaggcagtctagt
gggctgttggacagtgaaaaaagaaatgtggggattagcatccagcaggctagaactgtt
gatcaagggtccctcaccttaagtgggcagacttctttagatgttgtacataatctgtct
gtagttagaaatgtagagtcagctgaacagatgggggaaccttttctaaggcaagagtcg
cattctccatgtgaagttcctgattctgaattgagggaaacgtgcaagactggagtgaat
caagagaaaactggggatttaggatcagcttacatgaatgatgcagagactggatcttct
aggagaattttaaactggaaaggaggtggcgttggggttgatcaagaggtagtcaaacca
tgtaatcaaacagcagtagtagaaattgctgaaagtgtatttgggtcaagttccaatgcg
cagaacctcaattgcgagggtgttgtctgcagtgcagatttggattcacttctggaaaat
ggacatctaaatgcaaatggtgttttccaaaacagcttgtctgaagaattaaagccaaat
atcgcacttggaaaggttgtaaattctcaagatggagctaggtcagaaactttgcagaag
ccagtgatgaggcatgtgtttttggaacttctgttttgtttatgcaaattatga

  All links  
Gene (11)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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