KEGG   Theobroma cacao (cacao): 18604224
Entry
18604224          CDS       T02994                                 
Name
(RefSeq) nuclear poly(A) polymerase 1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    18604224
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18604224
Enzymes [BR:tcc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     18604224
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     18604224
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central
Other DBs
NCBI-GeneID: 18604224
NCBI-ProteinID: XP_017973478
Position
3:complement(3312109..3319895)
AA seq 762 aa
MGSPGLGNRNNGQRLGITEPISLGGPTDYDVIKTRELEKYLQNVGLYESQEEAVGREEVL
GRLDQTVKNWVKAISRAKGLNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHAT
REEDFFGELYKMLSEMPEVSELHPVPDAHVPVMKFKFKGVSIDLLYAKLSLWVIPEDLDI
SQDSILQNTDEQTVRSLNGCRVTDQILRLVPNIQNFRTTLRCMRFWAKRRGVYSNVAGFL
GGINWALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLQVWDPRK
NPKDRYHLMPIITPAYPCMNSSYNVSSSTLRIMTDEFQRGSEICEAMEANKADWDILFES
YAFFEAYKNYLQIDISAENADDLRKWKGWVESRLRQLTLKIERHTYNMLQCHPHPGDFQD
KSRPFHGSYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNMYTLWKPGMEIRVTHVKRR
NIPSFVFPGGVRPSRPSKVTWDSMRVSDAKVSGHAGPDKSGEVKGVADGQDDGKKRKRVD
DNGDAQLRSSKYITAVPSSSLEGHVGSPVSTVSSCSTKGDYSDATGLIETTREKAESNMT
NGLINSRSLEELSSHNGEVDGSVGCNPPIKVSADASSCTEAENLAIEKIMSGPYGAHQAF
PQELEELEDDLEFRNQVRSVENTKSGPVESSMSDLAGAAPVPSSNGAGPSTSLHASGGIE
ELEPAELTAMISNRIPSAPVAQRKPLIRLNFTSLGKASEKSG
NT seq 2289 nt   +upstreamnt  +downstreamnt
atggggagtcctggattaggaaatcgaaacaatggtcaaaggttaggcatcacggaacct
atttcgttgggtggaccgactgactacgatgtgatcaaaacccgagagctagaaaagtat
ttgcaaaatgtgggattgtatgagagtcaagaggaggctgttggccgagaggaagtactg
gggaggctagaccagactgtgaagaattgggttaaagcaattagccgtgcgaaaggtttg
aatgagcaattggttcaagaagcaaatgctaagatattcacctttggttcttatcgttta
ggggtgcatggccctggtgcagatatagatacactttgtgttggacctagacatgcaaca
cgagaagaggatttctttggtgagctatacaaaatgctatcagagatgcctgaagtatcg
gaattacaccctgtgcctgatgctcatgtcccagtcatgaaattcaaattcaaaggagtt
tccattgatcttctttatgcaaaactctcactttgggttattcccgaagacttagatata
tcgcaagactctatattacaaaatacagacgagcagacagttcgtagtcttaatggttgc
agagttactgaccaaattttacgattggttcccaatattcagaattttcggacaactttg
agatgcatgaggttttgggcaaaacgtcgtggtgtttattctaatgttgctggttttctt
ggtggtataaactgggcattgcttgttgctcgtatatgccagctataccctaatgctctg
cccaatatgttagtgtctcgattttttagggtgtatactcagtggcgttggccaaaccca
gtcatgctttgtgcaattgaggaaggatcccttggtcttcaagtttgggatcctcggaaa
aatccgaaagatagatatcatttgatgcccatcattactcctgcttatccttgcatgaat
tctagttacaatgtgtcatcgagtactttgcggatcatgacagatgagtttcagaggggt
agtgaaatttgtgaggctatggaggcaaataaagctgactgggatatcctttttgagtct
tatgctttctttgaagcatacaagaattatctacaaatagacatctctgcagaaaatgct
gatgatttaagaaagtggaaaggctgggttgagtcccgtctccgtcaacttacattgaag
attgaaaggcacacatataacatgcttcagtgccacccacatccgggtgattttcaagac
aaatctagacccttccatggcagttactttatgggtttgcaacgcaaacaaggagttcca
gtgaatgaaggtgaacaatttgatataaggttaactgttgaggagtttaaacactctgtc
aatatgtacactctgtggaagcctggaatggaaatccgtgtaacacatgtaaaacgtagg
aacatacctagctttgtatttcctggtggtgtccgaccttcccgtccatccaaagtaact
tgggatagtatgcgggtgtcagatgcaaaagtttctggccatgctggaccagacaagtca
ggtgaagttaagggagttgcagatggacaggatgatggaaagaagaggaagagggtagat
gacaatggagatgctcaattgagaagcagcaaatatattactgctgtgccttcctctagt
ctcgaaggtcacgtgggtagtccagtcagcactgtgagttcttgttcgacaaagggtgac
tattcagatgcaactggattgatcgaaacaacgagggaaaaagctgagagtaatatgacg
aatggcttaataaattcaagaagtttggaagagctttcttctcataatggtgaggttgat
ggatcagtgggatgtaatcctcctattaaggtttctgctgatgcatcaagctgtacagag
gcagagaacttggcaattgagaaaataatgtctggtccctatggtgcacaccaagctttt
ccacaggaacttgaagagcttgaagatgatttagagtttaggaaccaggtcagatctgtg
gagaacacaaaaagtggtcctgtggagtcttcaatgtcagatttggcgggggcagccccc
gtaccttccagtaatggagccggtccttccaccagtttacatgctagtgggggtatagag
gagttagagcctgcggaacttactgcaatgatatcgaatcggatcccatctgcacctgtg
gcccagaggaagccactaataagattgaacttcacttccttggggaaagcttctgagaaa
agtggatga

  All links  
Gene (13)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

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