KEGG   Triticum dicoccoides (wild emmer wheat): 119272876
Entry
119272876         CDS       T07278                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tdc  Triticum dicoccoides (wild emmer wheat)
Brite
KEGG Orthology (KO) [BR:tdc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119272876
Spliceosome [BR:tdc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    119272876
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    119272876
SSDB
Motif
Pfam: MA3 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 119272876
NCBI-ProteinID: XP_037410130
Position
3A:complement(687250622..687255891)
AA seq 785 aa
MAASASASPAASPPRRRRHRDDSPRRRHRDDSPRRGDHRKPRPSPSPSRSPSPDRDADRR
RRRSRASPPDRDADRRRRHDPNPSEGNGVAKPSKADDPPRSRARVSDGEEEDGRRARRPG
ASDDEKEGDRRRRRPRDSDDGRDDRHGSKRDRDRRRRRRSPSSESGSSPDDRRRRHRRDE
GSRRRVEDRGREERRASPERKEPTPPLPPPPPLPEMIPGRTGGIYIPPFRMAQMLRDVED
KASPEYQRLTWDALKKSINGLVNKVNATNIKNLVPELLAENLVRGRGLFCQSCIKSQMAS
PGFTDVFAALAAVVNTKFPEIGRLLLVRVMLQLKRAYKRNDKPQLLAATKFIAHLVNQVV
VHELVALELLTVLLDNPSDDSVEVAVGFVKECGAILQDLTPQGLHAMFERFRGILHEGEI
DKRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHDMSLETELDPETNLNVFRVN
PNFAEDEKAYENLKKSILGEDDEEEEGSDDASDGEDEEESDDEEDEEQMEIRDKTETNLI
NLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELNIMLLECCSQERTYLRYYGLLGQR
FCMINKVFQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEE
DTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQESFESVFPRDHPKNTRFSINFFTS
IGLGGITESLREYLKNMPRMIMQQQKPPSPSESESSGESSDSGSSSESESSSDESEKKRR
KRRKK
NT seq 2358 nt   +upstreamnt  +downstreamnt
atggccgcctccgcctccgcctcgcccgccgcctcgccgccccgccgccgccggcaccgc
gacgactccccgcgccgccggcaccgcgacgactccccgcgccgcggcgaccaccgcaag
ccccgcccgtcgccgtccccgtcgcgttccccctcccccgaccgcgacgccgaccgccgc
cgccgcagatctagggcttccccgcccgaccgtgatgccgaccgccgccgccgccacgac
cccaacccgtcggagggcaacggggtcgccaagcccagcaaggccgacgaccccccgcgg
tcgcgcgctagggtttccgacggggaggaggaggacggccgccgggcgaggcggcctggg
gcttccgacgacgagaaggagggcgaccgccggcggaggcgccccagggattccgacgac
gggagggacgaccgtcacggcagcaagcgcgaccgggaccggcggcggcgccgccggagc
cccagctccgagtcggggtcctcccccgacgaccgccggaggcggcaccgccgtgatgag
ggctctaggaggcgggtggaggaccgtggccgtgaggagcgccgggcaagccccgagagg
aaggagccgacgccaccgctgccacccccgccgccgctgcccgagatgatccctggccgc
acgggagggatctacatcccgcctttccgcatggcgcagatgctgcgggatgtggaggac
aaggcgagccccgagtaccagaggctcacgtgggatgctctcaagaagagcatcaatggg
ctggtcaacaaggtgaatgccaccaatatcaagaatcttgtgccggagctgttggccgag
aacctggttcgcgggcggggcctcttctgccagtcttgcataaagtcgcagatggcttca
cctgggtttacagatgtgtttgccgcgctggctgcggttgtcaataccaagttccctgag
attggtcggctgctgcttgtccgtgtcatgcttcagctcaagagggcctataagagaaat
gacaagccccaattgcttgcggcaaccaagttcatagcacacttggttaatcaggtggtt
gtgcacgagcttgtggctctggagcttcttactgtacttcttgataatccaagtgatgat
agtgttgaggtggcagtggggtttgtgaaagaatgcggagcaatattgcaggacttgact
cctcaggggcttcatgctatgtttgaacgattccgaggcattcttcatgaaggtgaaata
gacaagagagtacagtttctcattgaaggcctttttgctattagaaaggccaaatttcag
ggattcccagccatccggccagaactggatcttgtggagcaggaggaccaatttactcat
gatatgtcccttgaaactgaactagaccctgagactaatctaaatgttttcagagtaaac
ccgaactttgctgaagatgagaaggcctacgagaacctaaagaaaagcatcctgggagaa
gatgatgaagaggaagaagggtctgatgatgcttctgatggcgaggatgaagaagaatca
gatgatgaagaagacgaagagcagatggagataagagataaaactgagaccaatcttatc
aaccttcgaagaaccatatatttgacaatcatgtccagtgttgattttgaagaagctggt
cacaagcttctaaaaattaaacttgaacccgggcaagagatggagctgaacatcatgctt
ctcgagtgttgcagtcaagagaggacataccttcggtactatggtttattagggcagcgg
ttttgcatgattaataaagtttttcaagaaaactttgaaaaatgtttcgtgcaacagtat
tcgatgattcatcgtctcgaaacaaacaagttgaggaatgtcgccaagttcttcgcgcat
ttgttgggtactgatgctctcccttggcatgtcttggcctatatccggttgacagaggaa
gacaccacatcttcctcccggatttttataaagattctcttccaggaattgtcagagcat
cttggtatacgattgctcaacgagaggctaaatgatccaaacatgcaagaatcctttgag
tcggtcttcccaagagaccatccaaagaacaccagattctccataaatttcttcacctcc
atcggtctgggaggcatcacggagagcctgcgggagtacctgaagaacatgccccgcatg
ataatgcagcaacaaaagcctccctccccgtctgagtcggaatcaagcggagaaagctct
gattcagggtccagttctgagtctgaatcaagttctgatgagagcgagaaaaagcgaagg
aagagaaggaagaagtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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