KEGG T07278: 119278288

Triticum dicoccoides (wild emmer wheat): 119278288

Entry

119278288         CDS       T07278

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

tdc Triticum dicoccoides (wild emmer wheat)

Brite

KEGG Orthology (KO) [BR:tdc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tdc03041]
    119278288
Spliceosome [BR:tdc03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    119278288
Complex C
   U4/U6.U5 tri-SnRNP related factors
    119278288

SSDB

Motif

Pfam:

MA3 HEAT_5MP1_2

Other DBs

NCBI-GeneID:

119278288

NCBI-ProteinID:

XP_037415545

Position

3B:complement(754995860..755001014)

AA seq 774 aa
MAASPAASPPRRRRPRDGSPRRGDNRKPRPSPSPSPSPSPDRDADRRRRRSRASPPDRDA
DRRRRHDPNLSEGNGVAKPTKADDPPRSRARVSDGEEEDGRRARRPRASDDEKEGDRRRR
RPRDSDDGRDDRRGSKRDRDRDRRRRRRSPSSESGSSPDDRRRRHRRDEGSKRREEHRGR
EERRESPERKEPTPPLPPPPPLPEMIPGRTGGIYIPPFRMAQMLRDVEDKASPEYQRLTW
DALKKSINGLVNKVNATNIKNLVPELLAENLVRGRGLFCQSCIKSQMASPGFTDVFAALV
AVVNTKFPEIGRLLLVRVMLQLKRAYKRNDKPQLLAATKFIAHLVNQVVVHELVALELLT
VLLDNPSDDSVEVAVGFVKECGAILQDLTPQGLHAMFERFRGILHEGEIDKRVQFLIEGL
FAIRKAKFQGFPAIRPELDLVEQEDQFTHDMSLETELDPETNLNVFRVNPNFAEDEKAYE
NLKKSILGEDDEDEEGSDDASDGEDEEESDDEEDEEQMEIRDKTETNLINLRRTIYLTIM
SSVDFEEAGHKLLKIKLEPGQEMELNIMLLECCSQERTYLRYYGLLGQRFCMINKVFQEN
FEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIK
ILFQELSEHLGIRLLNERLNDPNMQASFESVFPRDHPKNTRFSINFFTSIGLGGITESLR
EYLKNMPRMIMQQQKPPSPSESESSGGSSDSGSSSESESSSDESEKKRRKRRKK

NT seq 2325 nt +upstreamnt +downstreamnt
atggccgcctcgcccgccgcctcgccgccccgccgtcgccggccccgcgacggctccccg
cgccgcggcgacaaccgcaagccccggccgtccccgtccccgtcaccctccccctccccc
gaccgcgacgccgaccgccgccgccgcagatctagggcttccccgcccgaccgtgatgcc
gaccgccgccgccgccacgaccccaacctctcggagggcaacggagtcgccaagcctacc
aaggccgacgaccccccgcgctcgcgcgctagggtttccgacggggaggaggaggacggc
cgccgggcgaggcggcctagggcttccgacgacgagaaggagggcgaccgccggcggagg
cgtcccagggattccgacgacgggagggacgaccgtcgcggcagcaagcgcgaccgcgac
cgggaccggcgccgccgccgccggagccccagctccgagtccgggtcctcccccgacgac
cgccggaggcgtcaccgccgcgacgagggctctaagaggcgggaggagcaccgtggccgc
gaggagcgccgggagagccccgagaggaaggagccgacgccaccgctgccaccccctccg
ccgctgccggagatgatccccggccgcacgggagggatctacatcccgcctttccgcatg
gcgcagatgctgcgggatgtggaggacaaggcgagccccgagtaccagaggctcacgtgg
gatgctctgaagaagagcatcaatggtctggtcaacaaggtgaatgcaaccaatatcaag
aatcttgtgccggagctgttggccgagaacctggttcgcgggcggggcctcttctgccag
tcatgcataaagtcgcagatggcttcacccgggtttacagatgtgtttgccgcgctggtt
gcagttgtcaataccaagttccctgagattggtcggctgttgcttgtacgtgttatgctt
cagctcaagagggcctataagagaaacgacaagccccaattgcttgcggcaaccaagttc
atagcacacttggttaatcaggtggttgtgcatgagcttgtggctctggagcttcttact
gtacttcttgataatccaagtgatgatagtgttgaggtggcagtggggtttgtgaaagaa
tgcggagcaatattgcaggacttgactcctcaggggcttcatgctatgtttgaacgattc
cgaggcattcttcatgaaggtgaaatagacaagagagtacagtttctcattgaaggcctt
tttgctattagaaaggccaaatttcagggattcccagccatccggccagaactggatctt
gtggagcaggaggaccaatttactcatgatatgtcccttgaaactgaactagaccctgag
actaatctaaatgttttcagagtaaacccgaactttgctgaagatgagaaagcctacgag
aacctaaagaaaagcatcctgggagaagatgatgaagatgaagaagggtctgatgatgct
tctgatggcgaggacgaagaagaatcagatgatgaagaggatgaagagcagatggagata
agagataaaactgagaccaatcttatcaaccttcgaagaaccatatatttgacaatcatg
tccagtgttgattttgaagaagctggtcacaagcttctaaaaattaaacttgaacccggg
caagagatggagctgaacatcatgcttctcgagtgttgcagtcaagagaggacatacctt
cgatactatggtttattagggcagcggttttgcatgattaataaagtttttcaagaaaac
tttgaaaaatgcttcgtgcaacagtattcgatgattcatcgtctcgaaacaaacaagttg
aggaatgtcgccaagttcttcgcgcatttgttgggtactgatgctctcccttggcatgtc
ttggcctatatccggttgacggaggaagacaccacgtcttcctcccggattttcataaag
attctcttccaggaactgtcagagcatcttggtatacgattgctcaatgagagactaaat
gatccaaacatgcaagcgtcctttgagtcggtcttcccaagagaccatccaaagaacacc
agattctccataaatttcttcacctccatcggtctgggaggcatcacggagagcctgcga
gagtacctgaagaacatgccccgcatgataatgcagcaacaaaagcccccctccccgtcc
gagtcggaatcaagcggaggaagctccgattcagggtccagttccgagtctgaatcaagt
tccgatgagagcgagaaaaagcgaaggaagagaaggaagaagtag

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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